RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C SRB4P32569 687 aa7.8□□□□□ -1.16
NUP57YGR119C FRD1P32614 470 aaKnown RBP7.8□□□□□ -1.16
NUP57YGR119C YBR184WP38299 523 aa7.8□□□□□ -1.16
NUP57YGR119C MED8P38304 223 aa7.8□□□□□ -1.16
NUP57YGR119C SAP1P39955 897 aaKnown RBP7.8□□□□□ -1.16
NUP57YGR119C THI6P41835 540 aa7.8□□□□□ -1.16
NUP57YGR119C VTC2P43585 828 aa7.8□□□□□ -1.16
NUP57YGR119C RET3P53600 189 aa7.8□□□□□ -1.16
NUP57YGR119C RPN4Q03465 531 aa7.8□□□□□ -1.16
NUP57YGR119C PRP42Q03776 544 aaKnown RBP7.8□□□□□ -1.16
NUP57YGR119C SHE9Q04172 456 aa7.8□□□□□ -1.16
NUP57YGR119C CWC2Q12046 339 aaPredicted RBP7.8□□□□□ -1.16
NUP57YGR119C PSF3Q12146 194 aa7.8□□□□□ -1.16
NUP57YGR119C TOM70P07213 617 aaKnown RBP7.79□□□□□ -1.16
NUP57YGR119C PPR1P07272 904 aaPredicted RBP7.79□□□□□ -1.16
NUP57YGR119C ECM32P32644 1121 aaKnown RBP7.79□□□□□ -1.16
NUP57YGR119C NFU1P32860 256 aa7.79□□□□□ -1.16
NUP57YGR119C CNS1P33313 385 aa7.79□□□□□ -1.16
NUP57YGR119C YKL107WP34251 309 aa7.79□□□□□ -1.16
NUP57YGR119C HSE1P38753 452 aa7.79□□□□□ -1.16
NUP57YGR119C TOM71P38825 639 aaKnown RBP7.79□□□□□ -1.16
NUP57YGR119C MPH1P40562 993 aa7.79□□□□□ -1.16
NUP57YGR119C MIC19P43594 170 aa7.79□□□□□ -1.16
NUP57YGR119C YGL176CP46945 554 aa7.79□□□□□ -1.16
NUP57YGR119C NCE103P53615 221 aa7.79□□□□□ -1.16
NUP57YGR119C VTC3Q02725 835 aa7.79□□□□□ -1.16
NUP57YGR119C TDA6Q06466 467 aa7.79□□□□□ -1.16
NUP57YGR119C NOP6Q07623 225 aaKnown RBP7.79□□□□□ -1.16
NUP57YGR119C THI72Q08579 599 aa7.79□□□□□ -1.16
NUP57YGR119C NUR1Q12066 484 aa7.79□□□□□ -1.16
NUP57YGR119C YOR131CQ12486 218 aa7.79□□□□□ -1.16
NUP57YGR119C RKM4Q12504 494 aa7.79□□□□□ -1.16
NUP57YGR119C HKR1P41809 1802 aa7.79□□□□□ -1.16
NUP57YGR119C FOB1O13329 566 aa7.78□□□□□ -1.16
NUP57YGR119C TUF1P02992 437 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C SRP54P20424 541 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C PAP1P29468 568 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C MLS1P30952 554 aa7.78□□□□□ -1.16
NUP57YGR119C PBP2P38151 413 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
NUP57YGR119C NSG2P53898 299 aa7.78□□□□□ -1.16
NUP57YGR119C DSE3Q08729 430 aa7.78□□□□□ -1.16
NUP57YGR119C RPL8BP29453 256 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C HXT1P32465 570 aa7.78□□□□□ -1.16
NUP57YGR119C MRP8P35719 219 aa7.78□□□□□ -1.16
NUP57YGR119C GPT2P36148 743 aa7.78□□□□□ -1.16
NUP57YGR119C YFL066CP43538 392 aa7.78□□□□□ -1.16
NUP57YGR119C IES1P43579 692 aa7.78□□□□□ -1.16
NUP57YGR119C VPS53P47061 822 aa7.78□□□□□ -1.16
NUP57YGR119C BUD9P53226 547 aa7.78□□□□□ -1.16
NUP57YGR119C SDA1P53313 767 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C UBX2Q04228 584 aa7.78□□□□□ -1.16
NUP57YGR119C RSA3Q05942 220 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C SFH1Q06168 426 aa7.78□□□□□ -1.16
NUP57YGR119C YLR001CQ07895 862 aa7.78□□□□□ -1.16
NUP57YGR119C SLK19Q08581 821 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C RUD3Q12234 484 aaKnown RBP7.78□□□□□ -1.16
NUP57YGR119C TOP1P04786 769 aa7.77□□□□□ -1.17
NUP57YGR119C RPS9BP05755 195 aaKnown RBP7.77□□□□□ -1.17
NUP57YGR119C CIT2P08679 460 aa7.77□□□□□ -1.17
NUP57YGR119C OM45P16547 393 aa7.77□□□□□ -1.17
NUP57YGR119C YHR020WP38708 688 aaKnown RBP7.77□□□□□ -1.17
NUP57YGR119C CCT3P39077 534 aaKnown RBP7.77□□□□□ -1.17
NUP57YGR119C VPS8P39702 1274 aa7.77□□□□□ -1.17
NUP57YGR119C HNT2P49775 206 aa7.77□□□□□ -1.17
NUP57YGR119C YPL062WQ02781 134 aa7.77□□□□□ -1.17
NUP57YGR119C POB3Q04636 552 aaKnown RBP7.77□□□□□ -1.17
NUP57YGR119C SOV1Q04748 898 aa7.77□□□□□ -1.17
NUP57YGR119C SMD2Q06217 110 aaKnown RBP7.77□□□□□ -1.17
NUP57YGR119C YPL216WQ08964 1102 aa7.77□□□□□ -1.17
NUP57YGR119C CAF20P12962 161 aaKnown RBP7.76□□□□□ -1.17
NUP57YGR119C RAD53P22216 821 aa7.76□□□□□ -1.17
NUP57YGR119C SMY1P32364 656 aaKnown RBP7.76□□□□□ -1.17
NUP57YGR119C SAS3P34218 831 aa7.76□□□□□ -1.17
NUP57YGR119C PET10P36139 283 aa7.76□□□□□ -1.17
NUP57YGR119C QNS1P38795 714 aaKnown RBP7.76□□□□□ -1.17
NUP57YGR119C IRR1P40541 1150 aa7.76□□□□□ -1.17
NUP57YGR119C ADY4Q05955 493 aa7.76□□□□□ -1.17
NUP57YGR119C IRC3Q06683 689 aa7.76□□□□□ -1.17
NUP57YGR119C SPO75Q07798 868 aa7.76□□□□□ -1.17
NUP57YGR119C PLP2Q12017 286 aa7.76□□□□□ -1.17
NUP57YGR119C CLF1Q12309 687 aaPredicted RBP7.76□□□□□ -1.17
NUP57YGR119C MYO1P08964 1928 aa7.76□□□□□ -1.17
NUP57YGR119C CDC8P00572 216 aa7.75□□□□□ -1.17
NUP57YGR119C RAD1P06777 1100 aa7.75□□□□□ -1.17
NUP57YGR119C RET1P22276 1149 aaKnown RBP7.75□□□□□ -1.17
NUP57YGR119C NFS1P25374 497 aa7.75□□□□□ -1.17
NUP57YGR119C SFA1P32771 386 aa7.75□□□□□ -1.17
NUP57YGR119C YJR079WP47126 109 aa7.75□□□□□ -1.17
NUP57YGR119C CCM1P48237 864 aaPredicted RBP7.75□□□□□ -1.17
NUP57YGR119C RNH70P53331 553 aa7.75□□□□□ -1.17
NUP57YGR119C MDM1Q01846 1127 aa7.75□□□□□ -1.17
NUP57YGR119C OPY2Q06810 360 aa7.75□□□□□ -1.17
NUP57YGR119C AI3P03877 415 aa7.74□□□□□ -1.17
NUP57YGR119C RPC53P25441 422 aa7.74□□□□□ -1.17
NUP57YGR119C SMY2P32909 740 aaKnown RBP7.74□□□□□ -1.17
NUP57YGR119C PIN4P34217 668 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
NUP57YGR119C MDJ1P35191 511 aa7.74□□□□□ -1.17
NUP57YGR119C TDA3P38758 523 aa7.74□□□□□ -1.17
NUP57YGR119C NMD3P38861 518 aaKnown RBP7.74□□□□□ -1.17
NUP57YGR119C SMC2P38989 1170 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms