RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeast

Gene LOC1, Length 615 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOC1	YFR001W	RET2	P43621	546 aa		4.24	□□□□□ -1.73
LOC1	YFR001W	STB4	P50104	949 aa		4.24	□□□□□ -1.73
LOC1	YFR001W	MUK1	Q02866	612 aa		4.24	□□□□□ -1.73
LOC1	YFR001W	OMS1	Q06668	471 aa		4.24	□□□□□ -1.73
LOC1	YFR001W	ACF2	Q12168	779 aa		4.24	□□□□□ -1.73
LOC1	YFR001W	PYC1	P11154	1178 aa	Known RBP	4.23	□□□□□ -1.73
LOC1	YFR001W	RNR1	P21524	888 aa	Known RBP	4.23	□□□□□ -1.73
LOC1	YFR001W	HIR1	P32479	840 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	CCT3	P39077	534 aa	Known RBP	4.23	□□□□□ -1.73
LOC1	YFR001W	UBP12	P39538	1254 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	NUP60	P39705	539 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	FMP52	P40008	231 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	GET2	P40056	285 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	CCT5	P40413	562 aa	Known RBP	4.23	□□□□□ -1.73
LOC1	YFR001W	DAS1	P47005	663 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	NOP9	P47077	666 aa	Known RBP	4.23	□□□□□ -1.73
LOC1	YFR001W	YGR237C	P50089	785 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	YGL081W	P53156	320 aa		4.23	□□□□□ -1.73
LOC1	YFR001W	YHL017W	P38745	532 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	FMO1	P38866	432 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	REV7	P38927	245 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	YNL195C	P40168	261 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	GPP1	P41277	250 aa	Known RBP	4.22	□□□□□ -1.73
LOC1	YFR001W	GZF3	P42944	551 aa	Known RBP	4.22	□□□□□ -1.73
LOC1	YFR001W	COX18	P53239	316 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	RIA1	P53893	1110 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	HFD1	Q04458	532 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	RGC1	Q06108	1083 aa	Known RBP	4.22	□□□□□ -1.73
LOC1	YFR001W	ISA1	Q07821	250 aa	Predicted RBP	4.22	□□□□□ -1.73
LOC1	YFR001W	SGO1	Q08490	590 aa		4.22	□□□□□ -1.73
LOC1	YFR001W	YTM1	Q12024	460 aa	Predicted RBP	4.22	□□□□□ -1.73
LOC1	YFR001W	SIR3	P06701	978 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	PEX1	P24004	1043 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	MVD1	P32377	396 aa	Known RBP	4.21	□□□□□ -1.74
LOC1	YFR001W	YKR075C	P36155	307 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	BFA1	P47113	574 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	YGR153W	P48238	217 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	PAN2	P53010	1115 aa	Predicted RBP	4.21	□□□□□ -1.74
LOC1	YFR001W	ECM9	Q02202	377 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	MCH5	Q08777	521 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	FAP7	Q12055	197 aa	Predicted RBP	4.21	□□□□□ -1.74
LOC1	YFR001W	ECM3	Q99252	613 aa		4.21	□□□□□ -1.74
LOC1	YFR001W	PCL5	P38794	229 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	SFB3	P38810	929 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
LOC1	YFR001W	HXT6	P39003	570 aa	Known RBP	4.2	□□□□□ -1.74
LOC1	YFR001W	HXT7	P39004	570 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	OAF1	P39720	1047 aa	Predicted RBP	4.2	□□□□□ -1.74
LOC1	YFR001W	RSC8	P43609	557 aa	Known RBP	4.2	□□□□□ -1.74
LOC1	YFR001W	TEL2	P53038	688 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	TIM44	Q01852	431 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	TMN2	Q04562	672 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	YLR407W	Q06070	228 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	VHS3	Q08438	674 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	DIA2	Q08496	732 aa	Predicted RBP	4.2	□□□□□ -1.74
LOC1	YFR001W	RPS21B	Q3E754	87 aa	Known RBP	4.2	□□□□□ -1.74
LOC1	YFR001W	YKL033W-A	Q86ZR7	236 aa		4.2	□□□□□ -1.74
LOC1	YFR001W	SWI6	P09959	803 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	IMG2	P25642	146 aa	Predicted RBP	4.19	□□□□□ -1.74
LOC1	YFR001W	GRX4	P32642	244 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	YKU70	P32807	602 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	YPT7	P32939	208 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	MNN11	P46985	422 aa	Known RBP	4.19	□□□□□ -1.74
LOC1	YFR001W	YAP1802	P53309	568 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	SSL2	Q00578	843 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	YMR210W	Q03649	449 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	VPS36	Q06696	566 aa		4.19	□□□□□ -1.74
LOC1	YFR001W	HBT1	Q07653	1046 aa	Known RBP	4.19	□□□□□ -1.74
LOC1	YFR001W	FRS1	P15624	595 aa	Known RBP	4.18	□□□□□ -1.74
LOC1	YFR001W	PET127	P32606	800 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	SEC6	P32844	805 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	DID4	P36108	232 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	YEN1	P40028	759 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	UBA2	P52488	636 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	THI22	Q06490	572 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	HFI1	Q12060	488 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	MLH3	Q12083	715 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	ZRT2	Q12436	422 aa		4.18	□□□□□ -1.74
LOC1	YFR001W	SEC65	P29478	273 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	BCS1	P32839	456 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	PHO11	P35842	467 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	OAF3	P36023	863 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	PHO12	P38693	467 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	SDS3	P40505	327 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	BIT61	P47041	543 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	FHN1	P53279	174 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	GND2	P53319	492 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	YHM2	Q04013	314 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	YPS7	Q06325	596 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	POM34	Q12445	299 aa		4.17	□□□□□ -1.74
LOC1	YFR001W	ERG20	P08524	352 aa	Known RBP	4.16	□□□□□ -1.74
LOC1	YFR001W	RPS21A	P0C0V8	87 aa	Known RBP	4.16	□□□□□ -1.74
LOC1	YFR001W	IME1	P21190	360 aa		4.16	□□□□□ -1.74
LOC1	YFR001W	MTH1	P35198	433 aa		4.16	□□□□□ -1.74
LOC1	YFR001W	FAT1	P38225	669 aa		4.16	□□□□□ -1.74
LOC1	YFR001W	BIT2	P38346	545 aa		4.16	□□□□□ -1.74
LOC1	YFR001W	CBR1	P38626	284 aa	Known RBP	4.16	□□□□□ -1.74
LOC1	YFR001W	NOP15	P53927	220 aa	Predicted RBP	4.16	□□□□□ -1.74
LOC1	YFR001W	PTA1	Q01329	785 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms