RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	YHR112C	P38716	378 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	GID8	P40208	455 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	BFA1	P47113	574 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	YNL034W	P53963	612 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	YNL018C	P53976	612 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	DLT1	Q04216	342 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	MCM21	Q06675	368 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	PLC1	P32383	869 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	DEF1	P35732	738 aa	Known RBP	4.9	□□□□□ -1.62
YFL040W	YFL040W	APN2	P38207	520 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	BEM4	P39011	633 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	DUG1	P43616	481 aa	Known RBP	4.9	□□□□□ -1.62
YFL040W	YFL040W	AMA1	P50082	593 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	PEX14	P53112	341 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	TEX1	P53851	422 aa	Known RBP	4.9	□□□□□ -1.62
YFL040W	YFL040W	REC102	Q02721	264 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	GAD1	Q04792	585 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	AIM39	Q08223	395 aa		4.9	□□□□□ -1.62
YFL040W	YFL040W	RPS21B	Q3E754	87 aa	Known RBP	4.9	□□□□□ -1.62
YFL040W	YFL040W	MET3	P08536	511 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	CAF20	P12962	161 aa	Known RBP	4.9	□□□□□ -1.63
YFL040W	YFL040W	EFT1	P32324	842 aa	Known RBP	4.9	□□□□□ -1.63
YFL040W	YFL040W	TFC4	P33339	1025 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	VPS24	P36095	224 aa	Known RBP	4.9	□□□□□ -1.63
YFL040W	YFL040W	APT2	P36973	181 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	GIP4	P39732	760 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	VPS72	Q03388	795 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	TRE2	Q08693	809 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	MPD2	Q99316	277 aa		4.9	□□□□□ -1.63
YFL040W	YFL040W	PIF1	P07271	859 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	RPS21A	P0C0V8	87 aa	Known RBP	4.89	□□□□□ -1.63
YFL040W	YFL040W	ERG4	P25340	473 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	HRR25	P29295	494 aa	Known RBP	4.89	□□□□□ -1.63
YFL040W	YFL040W	HIR1	P32479	840 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	TRZ1	P36159	838 aa	Predicted RBP	4.89	□□□□□ -1.63
YFL040W	YFL040W	ELO3	P40319	345 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	YIR042C	P40586	236 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	DAS1	P47005	663 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	MUP1	P50276	574 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	YHM2	Q04013	314 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	HFI1	Q12060	488 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	TRM13	Q12383	476 aa		4.89	□□□□□ -1.63
YFL040W	YFL040W	SWI6	P09959	803 aa		4.88	□□□□□ -1.63
YFL040W	YFL040W	LAT1	P12695	482 aa	Known RBP	4.88	□□□□□ -1.63
YFL040W	YFL040W	SEC65	P29478	273 aa		4.88	□□□□□ -1.63
YFL040W	YFL040W	KTR4	P38131	464 aa		4.88	□□□□□ -1.63
YFL040W	YFL040W	GPP2	P40106	250 aa	Known RBP	4.88	□□□□□ -1.63
YFL040W	YFL040W	PTA1	Q01329	785 aa	Predicted RBP	4.88	□□□□□ -1.63
YFL040W	YFL040W	HMO1	Q03973	246 aa	Known RBP	4.88	□□□□□ -1.63
YFL040W	YFL040W	YLR407W	Q06070	228 aa		4.88	□□□□□ -1.63
YFL040W	YFL040W	ISA1	Q07821	250 aa	Predicted RBP	4.88	□□□□□ -1.63
YFL040W	YFL040W	ATG11	Q12527	1178 aa		4.88	□□□□□ -1.63
YFL040W	YFL040W	PYC1	P11154	1178 aa	Known RBP	4.87	□□□□□ -1.63
YFL040W	YFL040W	KAR1	P11927	433 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	YCR015C	P25616	317 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	PWP2	P25635	923 aa	Known RBP	4.87	□□□□□ -1.63
YFL040W	YFL040W	PMI40	P29952	429 aa	Known RBP	4.87	□□□□□ -1.63
YFL040W	YFL040W	DAL3	P32459	195 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	TRM2	P33753	639 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	OAF3	P36023	863 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	YBR053C	P38235	358 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	YMR210W	Q03649	449 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	CTK1	Q03957	528 aa	Known RBP	4.87	□□□□□ -1.63
YFL040W	YFL040W	ECM16	Q04217	1267 aa	Known RBP	4.87	□□□□□ -1.63
YFL040W	YFL040W	RMP1	Q12530	201 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	APM4	Q99186	491 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	PEP1	P32319	1579 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	BPT1	P14772	1559 aa		4.87	□□□□□ -1.63
YFL040W	YFL040W	ATP4	P05626	244 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	RNR1	P21524	888 aa	Known RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	AEP2	P22136	580 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	ERG6	P25087	383 aa	Known RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	IMG2	P25642	146 aa	Predicted RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	PEA2	P40091	420 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	HOS4	P40480	1083 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	BAP3	P41815	604 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	NIT2	P47016	307 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	YLR040C	Q07988	224 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	NYV1	Q12255	253 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	HRP1	Q99383	534 aa	Known RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	SST2	P11972	698 aa	Known RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	TRX2	P22803	104 aa	Known RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	YKU70	P32807	602 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	FAT1	P38225	669 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	YNL195C	P40168	261 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	MTL1	P53214	551 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	COX18	P53239	316 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	NOP15	P53927	220 aa	Predicted RBP	4.86	□□□□□ -1.63
YFL040W	YFL040W	RNT1	Q02555	471 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	VHS3	Q08438	674 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	FRE5	Q08908	694 aa		4.86	□□□□□ -1.63
YFL040W	YFL040W	YEF3	P16521	1044 aa	Known RBP	4.85	□□□□□ -1.63
YFL040W	YFL040W	YKL222C	P35995	705 aa		4.85	□□□□□ -1.63
YFL040W	YFL040W	SUL1	P38359	859 aa		4.85	□□□□□ -1.63
YFL040W	YFL040W	URN1	Q06525	465 aa	Known RBP	4.85	□□□□□ -1.63
YFL040W	YFL040W	XRN1	P22147	1528 aa	Known RBP	4.84	□□□□□ -1.63
YFL040W	YFL040W	ALG7	P07286	448 aa		4.84	□□□□□ -1.63
YFL040W	YFL040W	PET127	P32606	800 aa		4.84	□□□□□ -1.63
YFL040W	YFL040W	LYS9	P38999	446 aa		4.84	□□□□□ -1.63
YFL040W	YFL040W	IES5	P40060	125 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 136.3 ms