RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	HBS1	P32769	611 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	LOT5	P34234	306 aa		4.28	□□□□□ -1.72
SPI1	YER150W	RER2	P35196	286 aa		4.28	□□□□□ -1.72
SPI1	YER150W	RMA1	P36001	430 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	KDX1	P36005	433 aa		4.28	□□□□□ -1.72
SPI1	YER150W	IRS4	P36115	615 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	RIM11	P38615	370 aa		4.28	□□□□□ -1.72
SPI1	YER150W	YMR124W	P39523	943 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	ALD5	P40047	520 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	NTA1	P40354	457 aa		4.28	□□□□□ -1.72
SPI1	YER150W	NEO1	P40527	1151 aa		4.28	□□□□□ -1.72
SPI1	YER150W	SHE4	P51534	789 aa		4.28	□□□□□ -1.72
SPI1	YER150W	RPN14	P53196	417 aa		4.28	□□□□□ -1.72
SPI1	YER150W	UTP22	P53254	1237 aa	Predicted RBP	4.28	□□□□□ -1.72
SPI1	YER150W	YGR266W	P53326	701 aa		4.28	□□□□□ -1.72
SPI1	YER150W	JJJ1	P53863	590 aa		4.28	□□□□□ -1.72
SPI1	YER150W	CBK1	P53894	756 aa		4.28	□□□□□ -1.72
SPI1	YER150W	CEG1	Q01159	459 aa	Predicted RBP	4.28	□□□□□ -1.72
SPI1	YER150W	MRPL13	Q02204	264 aa		4.28	□□□□□ -1.72
SPI1	YER150W	YML119W	Q03208	357 aa		4.28	□□□□□ -1.72
SPI1	YER150W	MGR3	Q04472	501 aa		4.28	□□□□□ -1.72
SPI1	YER150W	YLR345W	Q06137	509 aa		4.28	□□□□□ -1.72
SPI1	YER150W	PUS5	Q06244	254 aa		4.28	□□□□□ -1.72
SPI1	YER150W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SPI1	YER150W	ARP7	Q12406	477 aa		4.28	□□□□□ -1.72
SPI1	YER150W	PDH1	Q12428	516 aa	Known RBP	4.28	□□□□□ -1.72
SPI1	YER150W	SKS1	Q12505	502 aa		4.28	□□□□□ -1.72
SPI1	YER150W	LEU2	P04173	364 aa	Predicted RBP	4.27	□□□□□ -1.73
SPI1	YER150W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
SPI1	YER150W	SNF1	P06782	633 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	MOD5	P07884	428 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ENA1	P13587	1091 aa		4.27	□□□□□ -1.73
SPI1	YER150W	PUT4	P15380	627 aa		4.27	□□□□□ -1.73
SPI1	YER150W	HOP1	P20050	605 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ROX1	P25042	368 aa		4.27	□□□□□ -1.73
SPI1	YER150W	RRP43	P25359	394 aa	Predicted RBP	4.27	□□□□□ -1.73
SPI1	YER150W	RRP7	P25368	297 aa	Predicted RBP	4.27	□□□□□ -1.73
SPI1	YER150W	MGM1	P32266	881 aa		4.27	□□□□□ -1.73
SPI1	YER150W	SQT1	P35184	431 aa		4.27	□□□□□ -1.73
SPI1	YER150W	YKT6	P36015	200 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	PCM1	P38628	557 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	GND1	P38720	489 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	PIH1	P38768	344 aa		4.27	□□□□□ -1.73
SPI1	YER150W	AXL2	P38928	823 aa		4.27	□□□□□ -1.73
SPI1	YER150W	NPR2	P39923	615 aa		4.27	□□□□□ -1.73
SPI1	YER150W	PAC1	P39946	494 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	AIM10	P39965	576 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	LCB2	P40970	561 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ALG2	P43636	503 aa		4.27	□□□□□ -1.73
SPI1	YER150W	YJR098C	P47139	656 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ASK10	P48361	1146 aa		4.27	□□□□□ -1.73
SPI1	YER150W	NCS6	P53088	359 aa		4.27	□□□□□ -1.73
SPI1	YER150W	LSC1	P53598	329 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	ARP5	P53946	755 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ENA2	Q01896	1091 aa		4.27	□□□□□ -1.73
SPI1	YER150W	YPL107W	Q02873	248 aa		4.27	□□□□□ -1.73
SPI1	YER150W	RRB1	Q04225	511 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	RBA50	Q04418	439 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ECM38	Q05902	660 aa	Predicted RBP	4.27	□□□□□ -1.73
SPI1	YER150W	TSR1	Q07381	788 aa	Known RBP	4.27	□□□□□ -1.73
SPI1	YER150W	MDY2	Q12285	212 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ENA5	Q12691	1091 aa		4.27	□□□□□ -1.73
SPI1	YER150W	SEC39	Q12745	709 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ADF1	Q2V2Q1	113 aa		4.27	□□□□□ -1.73
SPI1	YER150W	ARG3	P05150	338 aa		4.26	□□□□□ -1.73
SPI1	YER150W	MET17	P06106	444 aa		4.26	□□□□□ -1.73
SPI1	YER150W	MTF2	P10849	440 aa		4.26	□□□□□ -1.73
SPI1	YER150W	INO1	P11986	533 aa		4.26	□□□□□ -1.73
SPI1	YER150W	KSS1	P14681	368 aa		4.26	□□□□□ -1.73
SPI1	YER150W	VMA3	P25515	160 aa		4.26	□□□□□ -1.73
SPI1	YER150W	DPH5	P32469	300 aa	Predicted RBP	4.26	□□□□□ -1.73
SPI1	YER150W	KRE6	P32486	720 aa		4.26	□□□□□ -1.73
SPI1	YER150W	GYP6	P32806	458 aa		4.26	□□□□□ -1.73
SPI1	YER150W	AFR1	P33304	620 aa		4.26	□□□□□ -1.73
SPI1	YER150W	WHI3	P34761	661 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	YUH1	P35127	236 aa		4.26	□□□□□ -1.73
SPI1	YER150W	ARL1	P38116	183 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	MBP1	P39678	833 aa		4.26	□□□□□ -1.73
SPI1	YER150W	RVS167	P39743	482 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	FIR1	P40020	876 aa		4.26	□□□□□ -1.73
SPI1	YER150W	CCT5	P40413	562 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	CAF16	P43569	289 aa		4.26	□□□□□ -1.73
SPI1	YER150W	TRF5	P48561	642 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	MON1	P53129	644 aa		4.26	□□□□□ -1.73
SPI1	YER150W	MDR1	P53258	950 aa		4.26	□□□□□ -1.73
SPI1	YER150W	OGG1	P53397	376 aa	Predicted RBP	4.26	□□□□□ -1.73
SPI1	YER150W	ARE2	P53629	642 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	SIW14	P53965	281 aa		4.26	□□□□□ -1.73
SPI1	YER150W	MOT3	P54785	490 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	SSL2	Q00578	843 aa		4.26	□□□□□ -1.73
SPI1	YER150W	OAZ1	Q02803	292 aa		4.26	□□□□□ -1.73
SPI1	YER150W	HLR1	Q04429	423 aa		4.26	□□□□□ -1.73
SPI1	YER150W	VID22	Q05934	901 aa		4.26	□□□□□ -1.73
SPI1	YER150W	HDA2	Q06629	674 aa		4.26	□□□□□ -1.73
SPI1	YER150W	NOP6	Q07623	225 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	ETT1	Q08421	412 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	YPR027C	Q12079	277 aa		4.26	□□□□□ -1.73
SPI1	YER150W	RTC5	Q12108	567 aa	Known RBP	4.26	□□□□□ -1.73
SPI1	YER150W	GCN4	P03069	281 aa		4.25	□□□□□ -1.73
SPI1	YER150W	CPA2	P03965	1118 aa	Known RBP	4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms