RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C RPN7Q06103 429 aaKnown RBP3.47□□□□□ -1.85
SMB1YER029C MCM21Q06675 368 aa3.47□□□□□ -1.85
SMB1YER029C HRP1Q99383 534 aaKnown RBP3.47□□□□□ -1.85
SMB1YER029C SFL1P20134 766 aa3.46□□□□□ -1.86
SMB1YER029C SPO11P23179 398 aa3.46□□□□□ -1.86
SMB1YER029C HIR1P32479 840 aa3.46□□□□□ -1.86
SMB1YER029C ORC2P32833 620 aa3.46□□□□□ -1.86
SMB1YER029C NMD2P38798 1089 aaKnown RBP3.46□□□□□ -1.86
SMB1YER029C FMP52P40008 231 aa3.46□□□□□ -1.86
SMB1YER029C GET2P40056 285 aa3.46□□□□□ -1.86
SMB1YER029C MGS1P40151 587 aa3.46□□□□□ -1.86
SMB1YER029C GAT1P43574 510 aa3.46□□□□□ -1.86
SMB1YER029C AIM14P53109 570 aa3.46□□□□□ -1.86
SMB1YER029C MET13P53128 600 aa3.46□□□□□ -1.86
SMB1YER029C MTL1P53214 551 aa3.46□□□□□ -1.86
SMB1YER029C BRE5P53741 515 aaKnown RBP3.46□□□□□ -1.86
SMB1YER029C YNL193WP53870 558 aa3.46□□□□□ -1.86
SMB1YER029C MRI1Q06489 411 aaKnown RBP3.46□□□□□ -1.86
SMB1YER029C DCS2Q12123 353 aa3.46□□□□□ -1.86
SMB1YER029C RPL8AP17076 256 aaKnown RBP3.45□□□□□ -1.86
SMB1YER029C FMO1P38866 432 aa3.45□□□□□ -1.86
SMB1YER029C HRB1P38922 454 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
SMB1YER029C YJR039WP47107 1121 aa3.45□□□□□ -1.86
SMB1YER029C NOP14Q99207 810 aaKnown RBP3.45□□□□□ -1.86
SMB1YER029C YUR1P26725 428 aa3.44□□□□□ -1.86
SMB1YER029C PPG1P32838 368 aa3.44□□□□□ -1.86
SMB1YER029C CBR1P38626 284 aaKnown RBP3.44□□□□□ -1.86
SMB1YER029C SSZ1P38788 538 aaKnown RBP3.44□□□□□ -1.86
SMB1YER029C CCT3P39077 534 aaKnown RBP3.44□□□□□ -1.86
SMB1YER029C TEL2P53038 688 aa3.44□□□□□ -1.86
SMB1YER029C YBP2P53169 641 aa3.44□□□□□ -1.86
SMB1YER029C ORC4P54791 529 aa3.44□□□□□ -1.86
SMB1YER029C SGO1Q08490 590 aa3.44□□□□□ -1.86
SMB1YER029C MNN4P36044 1178 aa3.43□□□□□ -1.86
SMB1YER029C TRZ1P36159 838 aaPredicted RBP3.43□□□□□ -1.86
SMB1YER029C MNN1P39106 762 aa3.43□□□□□ -1.86
SMB1YER029C PAN2P53010 1115 aaPredicted RBP3.43□□□□□ -1.86
SMB1YER029C SSL2Q00578 843 aa3.43□□□□□ -1.86
SMB1YER029C GIN4Q12263 1142 aa3.43□□□□□ -1.86
SMB1YER029C RNR1P21524 888 aaKnown RBP3.42□□□□□ -1.86
SMB1YER029C SEC6P32844 805 aa3.42□□□□□ -1.86
SMB1YER029C YPT7P32939 208 aa3.42□□□□□ -1.86
SMB1YER029C HIS7P33734 552 aaKnown RBP3.42□□□□□ -1.86
SMB1YER029C UBS1P38290 277 aa3.42□□□□□ -1.86
SMB1YER029C BEM4P39011 633 aa3.42□□□□□ -1.86
SMB1YER029C NUP60P39705 539 aa3.42□□□□□ -1.86
SMB1YER029C SET2P46995 733 aaKnown RBP3.42□□□□□ -1.86
SMB1YER029C FHN1P53279 174 aa3.42□□□□□ -1.86
SMB1YER029C DNM1P54861 757 aa3.42□□□□□ -1.86
SMB1YER029C SMX3P54999 86 aaPredicted RBP3.42□□□□□ -1.86
SMB1YER029C RIM13Q03792 727 aa3.42□□□□□ -1.86
SMB1YER029C PYC1P11154 1178 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C AKL1P38080 1108 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C YJL206CP39529 758 aa3.41□□□□□ -1.86
SMB1YER029C NUG1P40010 520 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C DOT6P40059 670 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C NOP9P47077 666 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C REC102Q02721 264 aa3.41□□□□□ -1.86
SMB1YER029C CTK1Q03957 528 aaKnown RBP3.41□□□□□ -1.86
SMB1YER029C THI22Q06490 572 aa3.41□□□□□ -1.86
SMB1YER029C GUD1Q07729 489 aa3.41□□□□□ -1.86
SMB1YER029C ECM3Q99252 613 aa3.41□□□□□ -1.86
SMB1YER029C MVD1P32377 396 aaKnown RBP3.4□□□□□ -1.87
SMB1YER029C APT2P36973 181 aa3.4□□□□□ -1.87
SMB1YER029C APN2P38207 520 aa3.4□□□□□ -1.87
SMB1YER029C SFB3P38810 929 aa3.4□□□□□ -1.87
SMB1YER029C YNL195CP40168 261 aa3.4□□□□□ -1.87
SMB1YER029C CCT7P42943 550 aaKnown RBP3.4□□□□□ -1.87
SMB1YER029C YJR096WP47137 282 aa3.4□□□□□ -1.87
SMB1YER029C YJR142WP47173 342 aa3.4□□□□□ -1.87
SMB1YER029C YAP1802P53309 568 aa3.4□□□□□ -1.87
SMB1YER029C MLH3Q12083 715 aa3.4□□□□□ -1.87
SMB1YER029C TAF3Q12297 353 aa3.4□□□□□ -1.87
SMB1YER029C RPN13O13563 156 aa3.39□□□□□ -1.87
SMB1YER029C THR1P17423 357 aaKnown RBP3.39□□□□□ -1.87
SMB1YER029C PEX1P24004 1043 aa3.39□□□□□ -1.87
SMB1YER029C EMP70P32802 667 aa3.39□□□□□ -1.87
SMB1YER029C PHO11P35842 467 aa3.39□□□□□ -1.87
SMB1YER029C PHO12P38693 467 aa3.39□□□□□ -1.87
SMB1YER029C YEL020CP39994 560 aa3.39□□□□□ -1.87
SMB1YER029C RSC8P43609 557 aaKnown RBP3.39□□□□□ -1.87
SMB1YER029C SEG1Q04279 960 aa3.39□□□□□ -1.87
SMB1YER029C YKL033W-AQ86ZR7 236 aa3.39□□□□□ -1.87
SMB1YER029C ADR1P07248 1323 aa3.39□□□□□ -1.87
SMB1YER029C HOM2P13663 365 aaKnown RBP3.38□□□□□ -1.87
SMB1YER029C BIT2P38346 545 aa3.38□□□□□ -1.87
SMB1YER029C CRP1P38845 465 aaKnown RBP3.38□□□□□ -1.87
SMB1YER029C YHR202WP38887 602 aa3.38□□□□□ -1.87
SMB1YER029C REV7P38927 245 aa3.38□□□□□ -1.87
SMB1YER029C SDA1P53313 767 aaKnown RBP3.38□□□□□ -1.87
SMB1YER029C VPS36Q06696 566 aa3.38□□□□□ -1.87
SMB1YER029C IME1P21190 360 aa3.37□□□□□ -1.87
SMB1YER029C IMG2P25642 146 aaPredicted RBP3.37□□□□□ -1.87
SMB1YER029C SET3P36124 751 aa3.37□□□□□ -1.87
SMB1YER029C CKB2P38930 258 aa3.37□□□□□ -1.87
SMB1YER029C NDC80P40460 691 aa3.37□□□□□ -1.87
SMB1YER029C RET2P43621 546 aa3.37□□□□□ -1.87
SMB1YER029C STB2P46679 850 aa3.37□□□□□ -1.87
SMB1YER029C GPG1P53130 126 aa3.37□□□□□ -1.87
SMB1YER029C RCR2Q03446 210 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms