RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C VPS16Q03308 798 aa4.68□□□□□ -1.66
PRP28YDR243C CWC21Q03375 135 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C MLH2Q07980 695 aa4.68□□□□□ -1.66
PRP28YDR243C GPN2Q08726 347 aaPredicted RBP4.68□□□□□ -1.66
PRP28YDR243C APL4Q12028 832 aa4.68□□□□□ -1.66
PRP28YDR243C ICL2Q12031 575 aa4.68□□□□□ -1.66
PRP28YDR243C ARP6Q12509 438 aa4.68□□□□□ -1.66
PRP28YDR243C BNR1P40450 1375 aa4.68□□□□□ -1.66
PRP28YDR243C SPS1P08458 490 aa4.68□□□□□ -1.66
PRP28YDR243C RPB2P08518 1224 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C MSS116P15424 664 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C DPB2P24482 689 aaPredicted RBP4.68□□□□□ -1.66
PRP28YDR243C YME1P32795 747 aa4.68□□□□□ -1.66
PRP28YDR243C AFR1P33304 620 aa4.68□□□□□ -1.66
PRP28YDR243C BAP2P38084 609 aa4.68□□□□□ -1.66
PRP28YDR243C MAK5P38112 773 aaPredicted RBP4.68□□□□□ -1.66
PRP28YDR243C RRM3P38766 723 aa4.68□□□□□ -1.66
PRP28YDR243C RRF1P38771 230 aa4.68□□□□□ -1.66
PRP28YDR243C LSM12P38828 187 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C SSN3P39073 555 aa4.68□□□□□ -1.66
PRP28YDR243C RPH1P39956 796 aa4.68□□□□□ -1.66
PRP28YDR243C MXR1P40029 184 aa4.68□□□□□ -1.66
PRP28YDR243C AIM9P40053 627 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C KTR7P40504 517 aa4.68□□□□□ -1.66
PRP28YDR243C TFG2P41896 400 aaPredicted RBP4.68□□□□□ -1.66
PRP28YDR243C VTC4P47075 721 aa4.68□□□□□ -1.66
PRP28YDR243C SPC105P53148 917 aa4.68□□□□□ -1.66
PRP28YDR243C RBG2P53295 368 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C SPO1P53541 631 aa4.68□□□□□ -1.66
PRP28YDR243C INA17Q02888 182 aa4.68□□□□□ -1.66
PRP28YDR243C WAR1Q03631 944 aa4.68□□□□□ -1.66
PRP28YDR243C ADE13Q05911 482 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C SEC10Q06245 871 aa4.68□□□□□ -1.66
PRP28YDR243C DXO1Q06349 442 aa4.68□□□□□ -1.66
PRP28YDR243C YOL057WQ08225 711 aa4.68□□□□□ -1.66
PRP28YDR243C DDP1Q99321 188 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C SIR4P11978 1358 aa4.68□□□□□ -1.66
PRP28YDR243C TUS1Q06412 1307 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-LR1P0C2J3 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-FP0CX63 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-GR2P0CX64 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-CP25384 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-DR2Q03494 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY1B-DR1Q03855 1755 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-DR3Q07791 1770 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C TY2B-OR1Q12113 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-DR1Q12472 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-BQ12491 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY2B-OR2Q12501 1770 aa4.67□□□□□ -1.66
PRP28YDR243C TY1B-DR3Q99231 1755 aa4.67□□□□□ -1.66
PRP28YDR243C CDC25P04821 1589 aa4.67□□□□□ -1.66
PRP28YDR243C SWI5P08153 709 aa4.67□□□□□ -1.66
PRP28YDR243C CKI1P20485 582 aa4.67□□□□□ -1.66
PRP28YDR243C MEF1P25039 761 aa4.67□□□□□ -1.66
PRP28YDR243C DAL1P32375 460 aa4.67□□□□□ -1.66
PRP28YDR243C HXT3P32466 567 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C RPT1P33299 467 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C CNS1P33313 385 aa4.67□□□□□ -1.66
PRP28YDR243C CPR5P35176 225 aa4.67□□□□□ -1.66
PRP28YDR243C VPS21P36017 210 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C SDH8P38345 138 aa4.67□□□□□ -1.66
PRP28YDR243C YHI9P38765 294 aa4.67□□□□□ -1.66
PRP28YDR243C RRP8P38961 392 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C PCF11P39081 626 aaPredicted RBP4.67□□□□□ -1.66
PRP28YDR243C JLP2P40206 208 aa4.67□□□□□ -1.66
PRP28YDR243C PCI8P40512 444 aa4.67□□□□□ -1.66
PRP28YDR243C LYS14P40971 790 aa4.67□□□□□ -1.66
PRP28YDR243C ROG3P43602 733 aa4.67□□□□□ -1.66
PRP28YDR243C TMA22P47089 198 aaPredicted RBP4.67□□□□□ -1.66
PRP28YDR243C STB4P50104 949 aa4.67□□□□□ -1.66
PRP28YDR243C LIF1P53150 421 aa4.67□□□□□ -1.66
PRP28YDR243C HXT17P53631 564 aa4.67□□□□□ -1.66
PRP28YDR243C PTA1Q01329 785 aaPredicted RBP4.67□□□□□ -1.66
PRP28YDR243C MEC3Q02574 474 aa4.67□□□□□ -1.66
PRP28YDR243C RRP17Q04031 235 aaPredicted RBP4.67□□□□□ -1.66
PRP28YDR243C TY1A-MR1Q04215 440 aa4.67□□□□□ -1.66
PRP28YDR243C YDL124WQ07551 312 aaKnown RBP4.67□□□□□ -1.66
PRP28YDR243C YLR125WQ12138 136 aa4.67□□□□□ -1.66
PRP28YDR243C TSC13Q99190 310 aa4.67□□□□□ -1.66
PRP28YDR243C SEY1Q99287 776 aa4.67□□□□□ -1.66
PRP28YDR243C SNT2P53127 1403 aa4.67□□□□□ -1.66
PRP28YDR243C GPA2P10823 449 aa4.66□□□□□ -1.66
PRP28YDR243C SNA3P14359 133 aa4.66□□□□□ -1.66
PRP28YDR243C ALG1P16661 449 aa4.66□□□□□ -1.66
PRP28YDR243C PWP1P21304 576 aaKnown RBP4.66□□□□□ -1.66
PRP28YDR243C ANP1P32629 500 aa4.66□□□□□ -1.66
PRP28YDR243C STO1P34160 861 aaKnown RBP4.66□□□□□ -1.66
PRP28YDR243C MRPL17P36528 281 aa4.66□□□□□ -1.66
PRP28YDR243C CCL1P37366 393 aa4.66□□□□□ -1.66
PRP28YDR243C MAL33P38157 468 aa4.66□□□□□ -1.66
PRP28YDR243C RIM11P38615 370 aa4.66□□□□□ -1.66
PRP28YDR243C OSH7P38755 437 aa4.66□□□□□ -1.66
PRP28YDR243C BUD16P39988 312 aa4.66□□□□□ -1.66
PRP28YDR243C UTP7P40055 554 aaKnown RBP4.66□□□□□ -1.66
PRP28YDR243C YFL034WP43564 1073 aa4.66□□□□□ -1.66
PRP28YDR243C MNN11P46985 422 aaKnown RBP4.66□□□□□ -1.66
PRP28YDR243C YJR039WP47107 1121 aa4.66□□□□□ -1.66
PRP28YDR243C LYS4P49367 693 aaPredicted RBP4.66□□□□□ -1.66
PRP28YDR243C ATP22P50273 684 aaPredicted RBP4.66□□□□□ -1.66
PRP28YDR243C PAN2P53010 1115 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 347 ms