RNA–Protein interactions for RNA: YDR165W

TRM82, Transcript of Catalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM82, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM82	YDR165W	YNL193W	P53870	558 aa		4.24	□□□□□ -1.73
TRM82	YDR165W	HMO1	Q03973	246 aa	Known RBP	4.24	□□□□□ -1.73
TRM82	YDR165W	SUT2	Q12286	268 aa		4.24	□□□□□ -1.73
TRM82	YDR165W	TUB1	P09733	447 aa	Known RBP	4.23	□□□□□ -1.73
TRM82	YDR165W	FMO1	P38866	432 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	LYS9	P38999	446 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	YJL206C	P39529	758 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	CTR1	P49573	406 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	PAN2	P53010	1115 aa	Predicted RBP	4.23	□□□□□ -1.73
TRM82	YDR165W	PCL10	P53124	433 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	ATG4	P53867	494 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	IOC4	Q04213	475 aa		4.23	□□□□□ -1.73
TRM82	YDR165W	RPN7	Q06103	429 aa	Known RBP	4.23	□□□□□ -1.73
TRM82	YDR165W	RPN13	O13563	156 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	SRD1	P09007	221 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	MEF1	P25039	761 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	MVD1	P32377	396 aa	Known RBP	4.22	□□□□□ -1.73
TRM82	YDR165W	GLG1	P36143	616 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	PMT3	P47190	753 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	FHN1	P53279	174 aa		4.22	□□□□□ -1.73
TRM82	YDR165W	YNR029C	P53729	429 aa	Known RBP	4.22	□□□□□ -1.73
TRM82	YDR165W	APM1	Q00776	475 aa	Predicted RBP	4.22	□□□□□ -1.73
TRM82	YDR165W	HRP1	Q99383	534 aa	Known RBP	4.22	□□□□□ -1.73
TRM82	YDR165W	PEX1	P24004	1043 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	GRX4	P32642	244 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	PPZ2	P33329	710 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	YKR051W	P36142	418 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	UBP12	P39538	1254 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	BDH2	P39713	417 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	SDA1	P53313	767 aa	Known RBP	4.21	□□□□□ -1.73
TRM82	YDR165W	COQ11	Q05892	277 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	DIA2	Q08496	732 aa	Predicted RBP	4.21	□□□□□ -1.73
TRM82	YDR165W	Q0142	Q9ZZW4	58 aa		4.21	□□□□□ -1.73
TRM82	YDR165W	SSB1	P11484	613 aa	Known RBP	4.21	□□□□□ -1.74
TRM82	YDR165W	MIH1	P23748	554 aa		4.21	□□□□□ -1.74
TRM82	YDR165W	SFB3	P38810	929 aa		4.21	□□□□□ -1.74
TRM82	YDR165W	SSB2	P40150	613 aa	Known RBP	4.21	□□□□□ -1.74
TRM82	YDR165W	CCT7	P42943	550 aa	Known RBP	4.21	□□□□□ -1.74
TRM82	YDR165W	ZRT2	Q12436	422 aa		4.21	□□□□□ -1.74
TRM82	YDR165W	RAD18	P10862	487 aa		4.2	□□□□□ -1.74
TRM82	YDR165W	RNR1	P21524	888 aa	Known RBP	4.2	□□□□□ -1.74
TRM82	YDR165W	PHO11	P35842	467 aa		4.2	□□□□□ -1.74
TRM82	YDR165W	PHO12	P38693	467 aa		4.2	□□□□□ -1.74
TRM82	YDR165W	YEN1	P40028	759 aa		4.2	□□□□□ -1.74
TRM82	YDR165W	DOT6	P40059	670 aa	Known RBP	4.2	□□□□□ -1.74
TRM82	YDR165W	LGE1	Q02796	332 aa	Known RBP	4.2	□□□□□ -1.74
TRM82	YDR165W	ARO10	Q06408	635 aa		4.2	□□□□□ -1.74
TRM82	YDR165W	NUP145	P49687	1317 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	ERG6	P25087	383 aa	Known RBP	4.19	□□□□□ -1.74
TRM82	YDR165W	ADY2	P25613	283 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	CCR4	P31384	837 aa	Known RBP	4.19	□□□□□ -1.74
TRM82	YDR165W	TOM20	P35180	183 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	APN2	P38207	520 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	RIX1	P38883	763 aa	Predicted RBP	4.19	□□□□□ -1.74
TRM82	YDR165W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TRM82	YDR165W	SET2	P46995	733 aa	Known RBP	4.19	□□□□□ -1.74
TRM82	YDR165W	YGR237C	P50089	785 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	IMO32	P53219	342 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	YLR001C	Q07895	862 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	THI73	Q07904	523 aa		4.19	□□□□□ -1.74
TRM82	YDR165W	SPO11	P23179	398 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	PRP28	P23394	588 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	PCL2	P25693	308 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	YEL020C	P39994	560 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	GET2	P40056	285 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	NOP9	P47077	666 aa	Known RBP	4.18	□□□□□ -1.74
TRM82	YDR165W	UME1	Q03010	460 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	ATG33	Q06485	197 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	GIN4	Q12263	1142 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	YNL162W-A	Q3E7A8	72 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	BNR1	P40450	1375 aa		4.18	□□□□□ -1.74
TRM82	YDR165W	ABF1	P14164	731 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	THR1	P17423	357 aa	Known RBP	4.17	□□□□□ -1.74
TRM82	YDR165W	SFL1	P20134	766 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	UBS1	P38290	277 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	BIT2	P38346	545 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	MGS1	P40151	587 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	PIG2	P40187	538 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	RSC8	P43609	557 aa	Known RBP	4.17	□□□□□ -1.74
TRM82	YDR165W	GPD1	Q00055	391 aa	Known RBP	4.17	□□□□□ -1.74
TRM82	YDR165W	MLH3	Q12083	715 aa		4.17	□□□□□ -1.74
TRM82	YDR165W	TYS1	P36421	394 aa	Known RBP	4.16	□□□□□ -1.74
TRM82	YDR165W	PCM1	P38628	557 aa	Known RBP	4.16	□□□□□ -1.74
TRM82	YDR165W	SSZ1	P38788	538 aa	Known RBP	4.16	□□□□□ -1.74
TRM82	YDR165W	YJR039W	P47107	1121 aa		4.16	□□□□□ -1.74
TRM82	YDR165W	ARP4	P80428	489 aa		4.16	□□□□□ -1.74
TRM82	YDR165W	HFD1	Q04458	532 aa		4.16	□□□□□ -1.74
TRM82	YDR165W	THI22	Q06490	572 aa		4.16	□□□□□ -1.74
TRM82	YDR165W	GUD1	Q07729	489 aa		4.16	□□□□□ -1.74
TRM82	YDR165W	FAP7	Q12055	197 aa	Predicted RBP	4.16	□□□□□ -1.74
TRM82	YDR165W	FUB1	P25659	250 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	EMP70	P32802	667 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	SEC6	P32844	805 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	GMH1	P36125	273 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	PAC2	P39937	518 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	UBC9	P50623	157 aa	Predicted RBP	4.15	□□□□□ -1.75
TRM82	YDR165W	MRK1	P50873	501 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	MET13	P53128	600 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	COX18	P53239	316 aa		4.15	□□□□□ -1.75
TRM82	YDR165W	BRE5	P53741	515 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms