RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	VPS36	Q06696	566 aa		3.55	□□□□□ -1.84
RTR2	YDR066C	THI73	Q07904	523 aa		3.55	□□□□□ -1.84
RTR2	YDR066C	MLH3	Q12083	715 aa		3.55	□□□□□ -1.84
RTR2	YDR066C	ACF2	Q12168	779 aa		3.55	□□□□□ -1.84
RTR2	YDR066C	RPS21B	Q3E754	87 aa	Known RBP	3.55	□□□□□ -1.84
RTR2	YDR066C	IMG2	P25642	146 aa	Predicted RBP	3.54	□□□□□ -1.84
RTR2	YDR066C	SFP1	P32432	683 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	YPT7	P32939	208 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	TRZ1	P36159	838 aa	Predicted RBP	3.54	□□□□□ -1.84
RTR2	YDR066C	APN2	P38207	520 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	YHL017W	P38745	532 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	YHR202W	P38887	602 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	NUP60	P39705	539 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	FHN1	P53279	174 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	MTQ2	Q03920	221 aa	Predicted RBP	3.54	□□□□□ -1.84
RTR2	YDR066C	THI22	Q06490	572 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	SGO1	Q08490	590 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	SUT2	Q12286	268 aa		3.54	□□□□□ -1.84
RTR2	YDR066C	SEC6	P32844	805 aa		3.53	□□□□□ -1.84
RTR2	YDR066C	PHO11	P35842	467 aa		3.53	□□□□□ -1.84
RTR2	YDR066C	PHO12	P38693	467 aa		3.53	□□□□□ -1.84
RTR2	YDR066C	CCT7	P42943	550 aa	Known RBP	3.53	□□□□□ -1.84
RTR2	YDR066C	COX18	P53239	316 aa		3.53	□□□□□ -1.84
RTR2	YDR066C	CTK1	Q03957	528 aa	Known RBP	3.53	□□□□□ -1.84
RTR2	YDR066C	YPS7	Q06325	596 aa		3.53	□□□□□ -1.84
RTR2	YDR066C	ISA1	Q07821	250 aa	Predicted RBP	3.53	□□□□□ -1.84
RTR2	YDR066C	THR1	P17423	357 aa	Known RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	IME1	P21190	360 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	PRP19	P32523	503 aa	Known RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	YKU70	P32807	602 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	SET3	P36124	751 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	TYS1	P36421	394 aa	Known RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	APT2	P36973	181 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	MAL31	P38156	614 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	CKB2	P38930	258 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	HXT6	P39003	570 aa	Known RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	HXT7	P39004	570 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	RSC8	P43609	557 aa	Known RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	RET2	P43621	546 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	DAS1	P47005	663 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	HLJ1	P48353	224 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	UBA2	P52488	636 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	RIA1	P53893	1110 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	SMX3	P54999	86 aa	Predicted RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	ECM9	Q02202	377 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	REC102	Q02721	264 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	UME1	Q03010	460 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	YLR407W	Q06070	228 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	MRH1	Q12117	320 aa	Predicted RBP	3.52	□□□□□ -1.85
RTR2	YDR066C	YGR161W-C	Q3E744	92 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	YKL033W-A	Q86ZR7	236 aa		3.52	□□□□□ -1.85
RTR2	YDR066C	NUP145	P49687	1317 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	RPS21A	P0C0V8	87 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	PEX1	P24004	1043 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	BCS1	P32839	456 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	FAT1	P38225	669 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	TDA3	P38758	523 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	CRP1	P38845	465 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	FPR3	P38911	411 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	GPP1	P41277	250 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	QRI1	P43123	477 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	DOS2	P54858	310 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	HBT1	Q07653	1046 aa	Known RBP	3.51	□□□□□ -1.85
RTR2	YDR066C	IRC10	Q08118	586 aa		3.51	□□□□□ -1.85
RTR2	YDR066C	SWI6	P09959	803 aa		3.5	□□□□□ -1.85
RTR2	YDR066C	CCT5	P40413	562 aa	Known RBP	3.5	□□□□□ -1.85
RTR2	YDR066C	YGR153W	P48238	217 aa		3.5	□□□□□ -1.85
RTR2	YDR066C	RFX1	P48743	811 aa		3.5	□□□□□ -1.85
RTR2	YDR066C	UTP14	Q04500	899 aa	Known RBP	3.5	□□□□□ -1.85
RTR2	YDR066C	USV1	Q12132	391 aa		3.5	□□□□□ -1.85
RTR2	YDR066C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
RTR2	YDR066C	TAD3	Q9URQ3	322 aa		3.5	□□□□□ -1.85
RTR2	YDR066C	DAL3	P32459	195 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	MSS1	P32559	526 aa	Predicted RBP	3.49	□□□□□ -1.85
RTR2	YDR066C	OAF3	P36023	863 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	BRN1	P38170	754 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	BIT2	P38346	545 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	CBR1	P38626	284 aa	Known RBP	3.49	□□□□□ -1.85
RTR2	YDR066C	OAF1	P39720	1047 aa	Predicted RBP	3.49	□□□□□ -1.85
RTR2	YDR066C	BIT61	P47041	543 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	STP4	Q07351	490 aa		3.49	□□□□□ -1.85
RTR2	YDR066C	FRS1	P15624	595 aa	Known RBP	3.48	□□□□□ -1.85
RTR2	YDR066C	FEN2	P25621	512 aa	Known RBP	3.48	□□□□□ -1.85
RTR2	YDR066C	EMP70	P32802	667 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	SER1	P33330	395 aa	Known RBP	3.48	□□□□□ -1.85
RTR2	YDR066C	REV7	P38927	245 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	UBP12	P39538	1254 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	NDC80	P40460	691 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	YIL077C	P40508	320 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	BUD8	P41698	603 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	YGR237C	P50089	785 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	NOP15	P53927	220 aa	Predicted RBP	3.48	□□□□□ -1.85
RTR2	YDR066C	SSL2	Q00578	843 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	TIM44	Q01852	431 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	VHS3	Q08438	674 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	TAF3	Q12297	353 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	ZRT2	Q12436	422 aa		3.48	□□□□□ -1.85
RTR2	YDR066C	GLN4	P13188	809 aa	Known RBP	3.47	□□□□□ -1.85
RTR2	YDR066C	CDC26	P14724	124 aa		3.47	□□□□□ -1.85
RTR2	YDR066C	SEC65	P29478	273 aa		3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms