RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W RSC8P43609 557 aaKnown RBP2□□□□□ -2.09
TRM3YDL112W YNL193WP53870 558 aa2□□□□□ -2.09
TRM3YDL112W SPH1Q06160 661 aa2□□□□□ -2.09
TRM3YDL112W XYL2Q07993 356 aa2□□□□□ -2.09
TRM3YDL112W YPL260WQ08977 551 aa2□□□□□ -2.09
TRM3YDL112W GNT1Q12096 491 aa2□□□□□ -2.09
TRM3YDL112W RRI2Q12348 645 aa2□□□□□ -2.09
TRM3YDL112W NCB2Q92317 146 aa2□□□□□ -2.09
TRM3YDL112W CDC16P09798 840 aa2□□□□□ -2.09
TRM3YDL112W DAL7P21826 554 aa2□□□□□ -2.09
TRM3YDL112W HSP78P33416 811 aa2□□□□□ -2.09
TRM3YDL112W RFC5P38251 354 aa2□□□□□ -2.09
TRM3YDL112W STB5P38699 743 aa2□□□□□ -2.09
TRM3YDL112W YFL052WP43551 465 aa2□□□□□ -2.09
TRM3YDL112W ALG12P53730 551 aa2□□□□□ -2.09
TRM3YDL112W YLR125WQ12138 136 aa2□□□□□ -2.09
TRM3YDL112W TAH18Q12181 623 aa2□□□□□ -2.09
TRM3YDL112W IRC8P47046 822 aa2□□□□□ -2.09
TRM3YDL112W ARI1P53111 347 aaKnown RBP2□□□□□ -2.09
TRM3YDL112W SKY1Q03656 742 aa2□□□□□ -2.09
TRM3YDL112W RPN7Q06103 429 aaKnown RBP2□□□□□ -2.09
TRM3YDL112W YKR073CP36153 106 aa2□□□□□ -2.09
TRM3YDL112W GEM1P39722 662 aa2□□□□□ -2.09
TRM3YDL112W HXT13P39924 564 aa2□□□□□ -2.09
TRM3YDL112W YER158CP40095 573 aa2□□□□□ -2.09
TRM3YDL112W TOK1P40310 691 aa2□□□□□ -2.09
TRM3YDL112W UBC9P50623 157 aaPredicted RBP2□□□□□ -2.09
TRM3YDL112W HXT17P53631 564 aa2□□□□□ -2.09
TRM3YDL112W HXT15P54854 567 aa2□□□□□ -2.09
TRM3YDL112W TFB2Q02939 513 aa2□□□□□ -2.09
TRM3YDL112W ECM16Q04217 1267 aaKnown RBP2□□□□□ -2.09
TRM3YDL112W YDR034W-BQ6Q5X2 51 aa2□□□□□ -2.09
TRM3YDL112W HBN1Q96VH4 193 aa2□□□□□ -2.09
TRM3YDL112W YMR084WA2P2R3 262 aa1.99□□□□□ -2.09
TRM3YDL112W POX1P13711 748 aa1.99□□□□□ -2.09
TRM3YDL112W MCM4P30665 933 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W SWC3P31376 625 aa1.99□□□□□ -2.09
TRM3YDL112W SYN8P31377 255 aa1.99□□□□□ -2.09
TRM3YDL112W RPT3P33298 428 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W KTR3P38130 404 aaPredicted RBP1.99□□□□□ -2.09
TRM3YDL112W YIR042CP40586 236 aa1.99□□□□□ -2.09
TRM3YDL112W ENP2P48234 707 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W MED7Q08278 222 aa1.99□□□□□ -2.09
TRM3YDL112W DAP1Q12091 152 aa1.99□□□□□ -2.09
TRM3YDL112W KIN2P13186 1147 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W BUD2P33314 1104 aa1.99□□□□□ -2.09
TRM3YDL112W YHR131CP38835 850 aa1.99□□□□□ -2.09
TRM3YDL112W NIT3P49954 291 aa1.99□□□□□ -2.09
TRM3YDL112W SDA1P53313 767 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W AHC1Q12433 566 aa1.99□□□□□ -2.09
TRM3YDL112W YLR422WQ06409 1932 aa1.99□□□□□ -2.09
TRM3YDL112W MSB1P21339 1137 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W TFC4P33339 1025 aa1.99□□□□□ -2.09
TRM3YDL112W DBP7P36120 742 aaKnown RBP1.99□□□□□ -2.09
TRM3YDL112W BET3P36149 193 aa1.99□□□□□ -2.09
TRM3YDL112W RDH54P38086 958 aa1.99□□□□□ -2.09
TRM3YDL112W YEN1P40028 759 aa1.99□□□□□ -2.09
TRM3YDL112W NPP1P25353 742 aa1.98□□□□□ -2.09
TRM3YDL112W UTR4P32626 227 aa1.98□□□□□ -2.09
TRM3YDL112W MYO3P36006 1272 aa1.98□□□□□ -2.09
TRM3YDL112W ECM21P38167 1117 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W OCA5P38738 679 aa1.98□□□□□ -2.09
TRM3YDL112W YNG2P38806 282 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W NOC2P39744 710 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W MCM6P53091 1017 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W AIM14P53109 570 aa1.98□□□□□ -2.09
TRM3YDL112W DUS4Q06063 367 aa1.98□□□□□ -2.09
TRM3YDL112W TRM11Q12463 433 aa1.98□□□□□ -2.09
TRM3YDL112W NOT3P06102 836 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W GAS1P22146 559 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W MCR1P36060 302 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W PHO88P38264 188 aaPredicted RBP1.98□□□□□ -2.09
TRM3YDL112W NMD2P38798 1089 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W JHD1P40034 492 aa1.98□□□□□ -2.09
TRM3YDL112W MPH1P40562 993 aa1.98□□□□□ -2.09
TRM3YDL112W BFA1P47113 574 aa1.98□□□□□ -2.09
TRM3YDL112W YGR053CP53234 283 aa1.98□□□□□ -2.09
TRM3YDL112W WHI4Q07655 649 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W RSC58Q07979 502 aa1.98□□□□□ -2.09
TRM3YDL112W ERP3Q12403 225 aa1.98□□□□□ -2.09
TRM3YDL112W YDR524C-BQ3E6R4 66 aa1.98□□□□□ -2.09
TRM3YDL112W YCL002CP25565 263 aa1.98□□□□□ -2.09
TRM3YDL112W FUB1P25659 250 aa1.98□□□□□ -2.09
TRM3YDL112W ALT1P52893 592 aa1.98□□□□□ -2.09
TRM3YDL112W DAK1P54838 584 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W PTA1Q01329 785 aaPredicted RBP1.98□□□□□ -2.09
TRM3YDL112W BRE1Q07457 700 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W RTP1Q12751 981 aa1.98□□□□□ -2.09
TRM3YDL112W Q0142Q9ZZW4 58 aa1.98□□□□□ -2.09
TRM3YDL112W SFA1P32771 386 aa1.98□□□□□ -2.09
TRM3YDL112W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
TRM3YDL112W CRP1P38845 465 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W HMF1P40037 129 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W SKP2P42843 763 aa1.98□□□□□ -2.09
TRM3YDL112W GNP1P48813 663 aa1.98□□□□□ -2.09
TRM3YDL112W BRE5P53741 515 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W RPS15Q01855 142 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W YDR514CQ04408 483 aa1.98□□□□□ -2.09
TRM3YDL112W POB3Q04636 552 aaKnown RBP1.98□□□□□ -2.09
TRM3YDL112W GAL10P04397 699 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 105 ms