RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C KCS1Q12494 1050 aa6.21□□□□□ -1.42
SEC18YBR080C RPL19AP0CX82 189 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C RPL19BP0CX83 189 aaPredicted RBP6.2□□□□□ -1.42
SEC18YBR080C HNM1P19807 563 aa6.2□□□□□ -1.42
SEC18YBR080C DBP3P20447 523 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C NGG1P32494 702 aa6.2□□□□□ -1.42
SEC18YBR080C YGL015CP33199 130 aa6.2□□□□□ -1.42
SEC18YBR080C YBR138CP38277 524 aa6.2□□□□□ -1.42
SEC18YBR080C TDA3P38758 523 aa6.2□□□□□ -1.42
SEC18YBR080C YIL161WP40449 235 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C VPS9P54787 451 aa6.2□□□□□ -1.42
SEC18YBR080C PEX25Q02969 394 aa6.2□□□□□ -1.42
SEC18YBR080C YML119WQ03208 357 aa6.2□□□□□ -1.42
SEC18YBR080C YDR344CQ05510 147 aa6.2□□□□□ -1.42
SEC18YBR080C SMD2Q06217 110 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C PHO92Q06390 306 aa6.2□□□□□ -1.42
SEC18YBR080C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
SEC18YBR080C FRE6Q12473 712 aa6.2□□□□□ -1.42
SEC18YBR080C PHO3P24031 467 aa6.2□□□□□ -1.42
SEC18YBR080C STE50P25344 346 aa6.2□□□□□ -1.42
SEC18YBR080C ADK2P26364 225 aa6.2□□□□□ -1.42
SEC18YBR080C MKS1P34072 584 aa6.2□□□□□ -1.42
SEC18YBR080C YKL151CP36059 337 aa6.2□□□□□ -1.42
SEC18YBR080C MIC60P36112 540 aa6.2□□□□□ -1.42
SEC18YBR080C SSN3P39073 555 aa6.2□□□□□ -1.42
SEC18YBR080C AGX1P43567 385 aa6.2□□□□□ -1.42
SEC18YBR080C HST1P53685 503 aa6.2□□□□□ -1.42
SEC18YBR080C NHX1Q04121 633 aa6.2□□□□□ -1.42
SEC18YBR080C UTP5Q04177 643 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C DPB4Q04603 196 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C SNO4Q04902 237 aa6.2□□□□□ -1.42
SEC18YBR080C HSP33Q08914 237 aaKnown RBP6.2□□□□□ -1.42
SEC18YBR080C HSP32Q08992 237 aa6.2□□□□□ -1.42
SEC18YBR080C SKS1Q12505 502 aa6.2□□□□□ -1.42
SEC18YBR080C EMC3P36039 253 aa6.19□□□□□ -1.42
SEC18YBR080C NEM1P38757 446 aa6.19□□□□□ -1.42
SEC18YBR080C YHR131CP38835 850 aa6.19□□□□□ -1.42
SEC18YBR080C RTS1P38903 757 aa6.19□□□□□ -1.42
SEC18YBR080C BFR1P38934 470 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42 RIP-Chip
SEC18YBR080C PNT1P38969 423 aa6.19□□□□□ -1.42
SEC18YBR080C FMP10P40098 244 aa6.19□□□□□ -1.42
SEC18YBR080C LCB2P40970 561 aa6.19□□□□□ -1.42
SEC18YBR080C IRC5P43610 853 aa6.19□□□□□ -1.42
SEC18YBR080C UTP22P53254 1237 aaPredicted RBP6.19□□□□□ -1.42
SEC18YBR080C YNR061CP53747 219 aa6.19□□□□□ -1.42
SEC18YBR080C CDC12P32468 407 aaKnown RBP6.19□□□□□ -1.42
SEC18YBR080C PGM2P37012 569 aaKnown RBP6.19□□□□□ -1.42
SEC18YBR080C PCH2P38126 564 aa6.19□□□□□ -1.42
SEC18YBR080C YBL086CP38177 466 aa6.19□□□□□ -1.42
SEC18YBR080C SIF2P38262 535 aa6.19□□□□□ -1.42
SEC18YBR080C SWD1P39706 426 aa6.19□□□□□ -1.42
SEC18YBR080C FET5P43561 622 aa6.19□□□□□ -1.42
SEC18YBR080C SPO1P53541 631 aa6.19□□□□□ -1.42
SEC18YBR080C TIM50Q02776 476 aa6.19□□□□□ -1.42
SEC18YBR080C HOS3Q02959 697 aaKnown RBP6.19□□□□□ -1.42
SEC18YBR080C YHM2Q04013 314 aa6.19□□□□□ -1.42
SEC18YBR080C DUS3Q06053 668 aaKnown RBP6.19□□□□□ -1.42
SEC18YBR080C PDH1Q12428 516 aaKnown RBP6.19□□□□□ -1.42
SEC18YBR080C SAC3P46674 1301 aa6.19□□□□□ -1.42
SEC18YBR080C STT3P39007 718 aaKnown RBP6.18□□□□□ -1.42
SEC18YBR080C SPO22P40511 975 aa6.18□□□□□ -1.42
SEC18YBR080C DBP9Q06218 594 aaKnown RBP6.18□□□□□ -1.42
SEC18YBR080C TGL5Q12043 749 aa6.18□□□□□ -1.42
SEC18YBR080C CWC2Q12046 339 aaPredicted RBP6.18□□□□□ -1.42
SEC18YBR080C LAS1P36146 502 aaPredicted RBP6.18□□□□□ -1.42
SEC18YBR080C PIM1P36775 1133 aa6.18□□□□□ -1.42
SEC18YBR080C VNX1P42839 908 aa6.18□□□□□ -1.42
SEC18YBR080C LAM5P43560 674 aa6.18□□□□□ -1.42
SEC18YBR080C SKP1P52286 194 aa6.18□□□□□ -1.42
SEC18YBR080C VPS75P53853 264 aa6.18□□□□□ -1.42
SEC18YBR080C CUS1Q02554 436 aaPredicted RBP6.18□□□□□ -1.42
SEC18YBR080C ECM22Q05958 814 aaPredicted RBP6.18□□□□□ -1.42
SEC18YBR080C YSH1Q06224 779 aaPredicted RBP6.18□□□□□ -1.42
SEC18YBR080C GNT1Q12096 491 aa6.18□□□□□ -1.42
SEC18YBR080C PSY3Q12318 242 aa6.18□□□□□ -1.42
SEC18YBR080C GLO4Q12320 285 aa6.18□□□□□ -1.42
SEC18YBR080C GRX6Q12438 231 aa6.18□□□□□ -1.42
SEC18YBR080C MIS1P09440 975 aaKnown RBP6.17□□□□□ -1.42
SEC18YBR080C PFK2P16862 959 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SEC18YBR080C HCA4P20448 770 aaKnown RBP6.17□□□□□ -1.42
SEC18YBR080C MRPL25P23369 157 aa6.17□□□□□ -1.42
SEC18YBR080C MCM3P24279 971 aaKnown RBP6.17□□□□□ -1.42
SEC18YBR080C KNS1P32350 737 aaPredicted RBP6.17□□□□□ -1.42
SEC18YBR080C BUD16P39988 312 aa6.17□□□□□ -1.42
SEC18YBR080C AIP1P46680 615 aaKnown RBP6.17□□□□□ -1.42
SEC18YBR080C NNF2P53253 936 aa6.17□□□□□ -1.42
SEC18YBR080C OAZ1Q02803 292 aa6.17□□□□□ -1.42
SEC18YBR080C RMT2Q03305 412 aa6.17□□□□□ -1.42
SEC18YBR080C GTB1Q04924 702 aa6.17□□□□□ -1.42
SEC18YBR080C DFG5Q05031 458 aa6.17□□□□□ -1.42
SEC18YBR080C YDL073WQ07454 984 aa6.17□□□□□ -1.42
SEC18YBR080C BMS1Q08965 1183 aaKnown RBP6.17□□□□□ -1.42
SEC18YBR080C PRT1P06103 763 aaKnown RBP6.16□□□□□ -1.42
SEC18YBR080C NUC1P08466 329 aa6.16□□□□□ -1.42
SEC18YBR080C CAF20P12962 161 aaKnown RBP6.16□□□□□ -1.42
SEC18YBR080C LCB1P25045 558 aaKnown RBP6.16□□□□□ -1.42
SEC18YBR080C CYS3P31373 394 aaKnown RBP6.16□□□□□ -1.42
SEC18YBR080C REC104P33323 182 aa6.16□□□□□ -1.42
SEC18YBR080C GCS1P35197 352 aa6.16□□□□□ -1.42
SEC18YBR080C CTF13P35203 478 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms