RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ITGA6P23229 1130 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 ZNF280AP59817 542 aaPredicted RBP18.71■□□□□ 0.59
TARDBP-231ENST00000639599 GCKRQ14397 625 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 G2E3Q7L622 706 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 COA1Q9GZY4 146 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 LEMD3Q9Y2U8 911 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
TARDBP-231ENST00000639599 H7C1W4 665 aa18.7■□□□□ 0.58
TARDBP-231ENST00000639599 NF2P35240 595 aa18.7■□□□□ 0.58
TARDBP-231ENST00000639599 TTLL12Q14166 644 aaPredicted RBP18.7■□□□□ 0.58
TARDBP-231ENST00000639599 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
TARDBP-231ENST00000639599 HDAC9Q9UKV0 1011 aa18.7■□□□□ 0.58
TARDBP-231ENST00000639599 ZNF609O15014 1411 aa18.69■□□□□ 0.58
TARDBP-231ENST00000639599 ANKRD18BA2A2Z9 1011 aa18.69■□□□□ 0.58
TARDBP-231ENST00000639599 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
TARDBP-231ENST00000639599 LINS1Q8NG48 757 aa18.69■□□□□ 0.58
TARDBP-231ENST00000639599 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
TARDBP-231ENST00000639599 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
TARDBP-231ENST00000639599 FKBP1BP68106 108 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 KIF23Q02241 960 aaPredicted RBP18.68■□□□□ 0.58
TARDBP-231ENST00000639599 TAF7LQ5H9L4 462 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 STRIP1Q5VSL9 837 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
TARDBP-231ENST00000639599 DGKZQ13574 1117 aa18.67■□□□□ 0.58
TARDBP-231ENST00000639599 SAGE1Q9NXZ1 904 aa18.67■□□□□ 0.58
TARDBP-231ENST00000639599 SLC10A3P09131 477 aa18.66■□□□□ 0.58
TARDBP-231ENST00000639599 MMP14P50281 582 aa18.66■□□□□ 0.58
TARDBP-231ENST00000639599 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
TARDBP-231ENST00000639599 IFIT5Q13325 482 aaKnown RBP18.66■□□□□ 0.58
TARDBP-231ENST00000639599 REM2Q8IYK8 340 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-231ENST00000639599 MCOLN1Q9GZU1 580 aa18.66■□□□□ 0.58
TARDBP-231ENST00000639599 DACT2Q5SW24 774 aa18.65■□□□□ 0.58
TARDBP-231ENST00000639599 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
TARDBP-231ENST00000639599 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
TARDBP-231ENST00000639599 GMLQ99445 158 aa18.65■□□□□ 0.58
TARDBP-231ENST00000639599 FAM155AB1AL88 458 aaPredicted RBP18.64■□□□□ 0.57
TARDBP-231ENST00000639599 TRPA1O75762 1119 aa18.64■□□□□ 0.57
TARDBP-231ENST00000639599 CHRNDQ07001 517 aa18.64■□□□□ 0.57
TARDBP-231ENST00000639599 MXD3Q9BW11 206 aa18.64■□□□□ 0.57
TARDBP-231ENST00000639599 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
TARDBP-231ENST00000639599 VAMP4O75379 141 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 GTF2IP78347 998 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 CCDC57Q2TAC2 916 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 NBPF9Q3BBW0 867 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
TARDBP-231ENST00000639599 WTIPA6NIX2 430 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-231ENST00000639599 SASH1O94885 1247 aa18.62■□□□□ 0.57
TARDBP-231ENST00000639599 CSF1RP07333 972 aa18.62■□□□□ 0.57
TARDBP-231ENST00000639599 ZNF804AQ7Z570 1209 aa18.62■□□□□ 0.57
TARDBP-231ENST00000639599 RASAL3Q86YV0 1011 aa18.62■□□□□ 0.57
TARDBP-231ENST00000639599 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
TARDBP-231ENST00000639599 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-231ENST00000639599 SCAF8Q9UPN6 1271 aaKnown RBP18.62■□□□□ 0.57
TARDBP-231ENST00000639599 F6X3S4 739 aa18.61■□□□□ 0.57
TARDBP-231ENST00000639599 WNT10BO00744 389 aa18.61■□□□□ 0.57
TARDBP-231ENST00000639599 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
TARDBP-231ENST00000639599 ARMC9Q7Z3E5 817 aa18.61■□□□□ 0.57
TARDBP-231ENST00000639599 RNF186Q9NXI6 227 aa18.61■□□□□ 0.57
TARDBP-231ENST00000639599 MYO1BO43795 1136 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 CASP7P55210 303 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 MLLT1Q03111 559 aaPredicted RBP18.6■□□□□ 0.57
TARDBP-231ENST00000639599 DLGAP5Q15398 846 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 TXNRD3Q86VQ6 643 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 CNNM1Q9NRU3 951 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 SCN9AQ15858 1988 aa18.6■□□□□ 0.57
TARDBP-231ENST00000639599 UBE2Q2LH0YL09 131 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 PLIN1O60240 522 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 TAF5LO75529 589 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 KLRK1P26718 216 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 CD209Q9NNX6 404 aa18.59■□□□□ 0.57
TARDBP-231ENST00000639599 GRM8O00222 908 aa18.58■□□□□ 0.56
TARDBP-231ENST00000639599 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
TARDBP-231ENST00000639599 LMBR1LQ6UX01 489 aa18.58■□□□□ 0.56
TARDBP-231ENST00000639599 LDHAL6AQ6ZMR3 332 aa18.58■□□□□ 0.56
TARDBP-231ENST00000639599 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
TARDBP-231ENST00000639599 PAPPA2Q9BXP8 1791 aa18.58■□□□□ 0.56
TARDBP-231ENST00000639599 SREBF2Q12772 1141 aa18.57■□□□□ 0.56
TARDBP-231ENST00000639599 PRKG1Q13976 671 aa18.57■□□□□ 0.56
TARDBP-231ENST00000639599 MOB2Q70IA6 237 aa18.57■□□□□ 0.56
TARDBP-231ENST00000639599 SRCIN1Q9C0H9 1055 aa18.57■□□□□ 0.56
TARDBP-231ENST00000639599 F8W031 263 aaPredicted RBP18.56■□□□□ 0.56
TARDBP-231ENST00000639599 ALDH1L1O75891 902 aa18.56■□□□□ 0.56
TARDBP-231ENST00000639599 RBM5P52756 815 aaKnown RBP eCLIP18.56■□□□□ 0.56
TARDBP-231ENST00000639599 MKRN3Q13064 507 aaKnown RBP18.56■□□□□ 0.56
TARDBP-231ENST00000639599 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
TARDBP-231ENST00000639599 MYH3P11055 1940 aa18.55■□□□□ 0.56
TARDBP-231ENST00000639599 FOXO4P98177 505 aa18.55■□□□□ 0.56
TARDBP-231ENST00000639599 SPEF2Q9C093 1822 aa18.54■□□□□ 0.56
TARDBP-231ENST00000639599 C15orf52Q6ZUT6 534 aaKnown RBP18.54■□□□□ 0.56
TARDBP-231ENST00000639599 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
TARDBP-231ENST00000639599 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
TARDBP-231ENST00000639599 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
TARDBP-231ENST00000639599 SNAP23O00161 211 aa18.53■□□□□ 0.56
TARDBP-231ENST00000639599 PPP1R12BO60237 982 aaPredicted RBP18.53■□□□□ 0.56
TARDBP-231ENST00000639599 VPS37DQ86XT2 251 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms