RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 PODNQ7Z5L7 613 aa14.5□□□□□ -0.09
PTP4A1-207ENST00000639568 LAMB4A4D0S4 1761 aa14.5□□□□□ -0.09
PTP4A1-207ENST00000639568 SH3TC2Q8TF17 1288 aa14.49□□□□□ -0.09
PTP4A1-207ENST00000639568 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
PTP4A1-207ENST00000639568 FAM89AQ96GI7 184 aa14.49□□□□□ -0.09
PTP4A1-207ENST00000639568 PRO3102Q9H379 93 aa14.49□□□□□ -0.09
PTP4A1-207ENST00000639568 FZD1Q9UP38 647 aa14.49□□□□□ -0.09
PTP4A1-207ENST00000639568 SASH1O94885 1247 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 ANXA1P04083 346 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 PDIA6Q15084 440 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 LRP10Q7Z4F1 713 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 NKX2-3Q8TAU0 364 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 XAGE3Q8WTP9 111 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 CLMNQ96JQ2 1002 aa14.48□□□□□ -0.09
PTP4A1-207ENST00000639568 LRRC37AA6NMS7 1700 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 UNCXA6NJT0 531 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 SOX1O00570 391 aaPredicted RBP14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 PER1O15534 1290 aaPredicted RBP14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 MMP14P50281 582 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 CAP1Q01518 475 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 KIF22Q14807 665 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 PROSER3Q2NL68 480 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 COL25A1Q9BXS0 654 aaPredicted RBP14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 ANKRD36CQ5JPF3 1778 aa14.47□□□□□ -0.09
PTP4A1-207ENST00000639568 DDX60Q8IY21 1712 aaKnown RBP14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 MYO3BQ8WXR4 1341 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 MAP3K11Q16584 847 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 DEFB123Q8N688 67 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 DEFB129Q9H1M3 183 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
PTP4A1-207ENST00000639568 IREB2P48200 963 aaKnown RBP14.45□□□□□ -0.1
PTP4A1-207ENST00000639568 SUPT20HL1Q3ZLR7 823 aa14.45□□□□□ -0.1
PTP4A1-207ENST00000639568 PTPN18Q99952 460 aa14.45□□□□□ -0.1
PTP4A1-207ENST00000639568 MXD3Q9BW11 206 aa14.45□□□□□ -0.1
PTP4A1-207ENST00000639568 STXBP5LQ9Y2K9 1186 aa14.45□□□□□ -0.1
PTP4A1-207ENST00000639568 UNC80Q8N2C7 3258 aa14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 IRS4O14654 1257 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 ATP2B4P23634 1241 aa14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 DACT2Q5SW24 774 aa14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 TSPYL4Q9UJ04 414 aa14.44□□□□□ -0.1
PTP4A1-207ENST00000639568 XDHP47989 1333 aa14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 TESPA1A2RU30 521 aaPredicted RBP14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 EVI5O60447 810 aa14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 HSP90B1P14625 803 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 GPR153Q6NV75 609 aa14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 SEC31BQ9NQW1 1179 aa14.43□□□□□ -0.1
PTP4A1-207ENST00000639568 LAMB2P55268 1798 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 SCN9AQ15858 1988 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 GNRH1P01148 92 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 STRIP1Q5VSL9 837 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 ANKRD13AQ8IZ07 590 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 PPP2R3BQ9Y5P8 575 aa14.42□□□□□ -0.1
PTP4A1-207ENST00000639568 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 GJA5P36382 358 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 PRMT2P55345 433 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 MTFR1Q15390 333 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 KIAA0825Q8IV33 1275 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 STAP2Q9UGK3 403 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 TAF1P21675 1872 aa14.41□□□□□ -0.1
PTP4A1-207ENST00000639568 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 GJA8P48165 433 aa14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 OPTNQ96CV9 577 aa14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
PTP4A1-207ENST00000639568 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 MYO1BO43795 1136 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 GJB1P08034 283 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 GTF2A2P52657 109 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 CCL15Q16663 113 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 Q7L0L9 218 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 ANKRD18AQ8IVF6 992 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 COA1Q9GZY4 146 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
PTP4A1-207ENST00000639568 USP2O75604 605 aaPredicted RBP14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 FARP2O94887 1054 aaPredicted RBP14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 LACTBP83111 547 aaPredicted RBP14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 UBE2Q1Q7Z7E8 422 aa14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
PTP4A1-207ENST00000639568 CCL5P13501 91 aa14.37□□□□□ -0.11
PTP4A1-207ENST00000639568 HOXD10P28358 340 aa14.37□□□□□ -0.11
PTP4A1-207ENST00000639568 BRI3BPQ8WY22 251 aa14.37□□□□□ -0.11
PTP4A1-207ENST00000639568 ZBED3Q96IU2 234 aaPredicted RBP14.37□□□□□ -0.11
PTP4A1-207ENST00000639568 KDM3BQ7LBC6 1761 aa14.37□□□□□ -0.11
PTP4A1-207ENST00000639568 MED23Q9ULK4 1368 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms