RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 TPM1P09493 284 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 ZAP70P43403 619 aa11.53□□□□□ -0.56
KCNMA1-228ENST00000638223 CHMLP26374 656 aa11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 NLRP5P59047 1200 aa11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 GTF2IP78347 998 aa11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 GSE1Q14687 1217 aa11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.56
KCNMA1-228ENST00000638223 MBD3O95983 291 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 SLC26A6Q9BXS9 759 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 MMP10P09238 476 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 OLFM4Q6UX06 510 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 EAF2Q96CJ1 260 aaPredicted RBP11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
KCNMA1-228ENST00000638223 PLCG2P16885 1265 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 C3P01024 1663 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 TPM3P06753 285 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 KIF5BP33176 963 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 SSRP1Q08945 709 aaKnown RBP11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 DHX8Q14562 1220 aaKnown RBP11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 ZNF408Q9H9D4 720 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 PRDM1O75626 825 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 SSH3Q8TE77 659 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 FAM227BQ96M60 508 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 HLFQ16534 295 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 KRT23Q9C075 422 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 ZNF521Q96K83 1311 aa11.51□□□□□ -0.57
KCNMA1-228ENST00000638223 ZBTB43O43298 467 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 IBSPP21815 317 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 CEP89Q96ST8 783 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 ZKSCAN3Q9BRR0 538 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 BCAMP50895 628 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 PRKG1Q13976 671 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 ARHGAP27Q6ZUM4 889 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 WDR66Q8TBY9 1149 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 CRB1P82279 1406 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 SOS2Q07890 1332 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 PRC1O43663 620 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 CPA1P15085 419 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 TCP10Q12799 353 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 FAM13BQ9NYF5 915 aa11.5□□□□□ -0.57
KCNMA1-228ENST00000638223 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 RXRAP19793 462 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 CHRNDQ07001 517 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 TXNRD1Q16881 649 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 MFSD14BQ5SR56 506 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 Q6ZUG5 572 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 SPATA5Q8NB90 893 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 GPAA1O43292 621 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 NF2P35240 595 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 GNAT2P19087 354 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 GJB2P29033 226 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 VPS72Q15906 364 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 CREB3L3Q68CJ9 461 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 KIAA0825Q8IV33 1275 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 GDPD2Q9HCC8 539 aa11.49□□□□□ -0.57
KCNMA1-228ENST00000638223 SETBP1Q9Y6X0 1596 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 SUSD4Q5VX71 490 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 APPBP2Q92624 585 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 CUL5Q93034 780 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 TTC6Q86TZ1 520 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 SEC24BO95487 1268 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 SPATA31D1Q6ZQQ2 1576 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 TMX3Q96JJ7 454 aa11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 TTF2Q9UNY4 1162 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-228ENST00000638223 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-228ENST00000638223 EPS15P42566 896 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms