RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 ORC1Q13415 861 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 DSC3Q14574 896 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 DNAJC14Q6Y2X3 702 aaPredicted RBP3.8□□□□□ -1.8
CD46-219ENST00000636114 NCAPG2Q86XI2 1143 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 BTBD6Q96KE9 485 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 SPACA7Q96KW9 195 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 RBSNQ9H1K0 784 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 DNAJC25Q9H1X3 360 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 AMOTL2Q9Y2J4 779 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 TOPBP1Q92547 1522 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 CLSPNQ9HAW4 1339 aa3.8□□□□□ -1.8
CD46-219ENST00000636114 EDN3P14138 238 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 ERCC3P19447 782 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 FMR1Q06787 632 aaKnown RBP eCLIP3.79□□□□□ -1.8
CD46-219ENST00000636114 PSAPL1Q6NUJ1 521 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 HFE2Q6ZVN8 426 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 CSRNP1Q96S65 589 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 ZFYVE28Q9HCC9 887 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 FRRS1LQ9P0K9 344 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 STARD13Q9Y3M8 1113 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 CUL7Q14999 1698 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 ANKRD33BA6NCL7 494 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 EIF1AYO14602 144 aaKnown RBP3.79□□□□□ -1.8
CD46-219ENST00000636114 DGKGP49619 791 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 PLCB3Q01970 1234 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 COL19A1Q14993 1142 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 PERM1Q5SV97 790 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 COL13A1Q5TAT6 717 aaPredicted RBP3.79□□□□□ -1.8
CD46-219ENST00000636114 ELMSAN1Q6PJG2 1045 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 RRAGCQ9HB90 399 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 SALL4Q9UJQ4 1053 aa3.79□□□□□ -1.8
CD46-219ENST00000636114 POLA1P09884 1462 aaPredicted RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 J3QW42 95 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 M0R082 166 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 LILRB5O75023 590 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 RGS9O75916 674 aaPredicted RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 ALBP02768 609 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 MAPK8P45983 427 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 MFAP1P55081 439 aaKnown RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 ENOX2Q16206 610 aaKnown RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 C20orf204Q6ZNR8 217 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 PODNQ7Z5L7 613 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 MICALL1Q8N3F8 863 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 CEP120Q8N960 986 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 ZNF417Q8TAU3 575 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 PLD4Q96BZ4 506 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 ZNF587Q96SQ5 575 aaPredicted RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 LPIN3Q9BQK8 851 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 SMG9Q9H0W8 520 aaKnown RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 JPH1Q9HDC5 661 aaPredicted RBP3.78□□□□□ -1.8
CD46-219ENST00000636114 PRDM6Q9NQX0 595 aa3.78□□□□□ -1.8
CD46-219ENST00000636114 PNMA6FA0A0J9YX94 578 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 PIK3R2O00459 728 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 SMNDC1O75940 238 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD46-219ENST00000636114 P4HBP07237 508 aaKnown RBP3.77□□□□□ -1.81
CD46-219ENST00000636114 HOXB4P17483 251 aaPredicted RBP3.77□□□□□ -1.81
CD46-219ENST00000636114 NPAS4Q8IUM7 802 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 GALNT12Q8IXK2 581 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 NUDT8Q8WV74 236 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 TTC9Q92623 222 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 MKL2Q9ULH7 1088 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 ADAMTS8Q9UP79 889 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 ARAP1Q96P48 1450 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 ARHGAP35Q9NRY4 1499 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 EFCAB5A4FU69 1503 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 POLR3DP05423 398 aaPredicted RBP3.77□□□□□ -1.81
CD46-219ENST00000636114 ATP11AP98196 1134 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 ATP2B2Q01814 1243 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 USPL1Q5W0Q7 1092 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 FBF1Q8TES7 1133 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 CCDC74AQ96AQ1 378 aa3.77□□□□□ -1.81
CD46-219ENST00000636114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.77□□□□□ -1.81
CD46-219ENST00000636114 WDR97A6NE52 1622 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 GNB5O14775 395 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 AFF1P51825 1210 aaKnown RBP3.76□□□□□ -1.81
CD46-219ENST00000636114 SNRPNP63162 240 aaKnown RBP3.76□□□□□ -1.81
CD46-219ENST00000636114 FGD1P98174 961 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 PEAR1Q5VY43 1037 aaPredicted RBP3.76□□□□□ -1.81
CD46-219ENST00000636114 FMN1Q68DA7 1419 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 ALG1LQ6GMV1 187 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 C8orf86Q6ZUL3 223 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 OSMRQ99650 979 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 ZKSCAN3Q9BRR0 538 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 PBX4Q9BYU1 374 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 RASSF4Q9H2L5 321 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 NPHS2Q9NP85 383 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 LATS2Q9NRM7 1088 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 DZANK1Q9NVP4 752 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 NESP48681 1621 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 AQRO60306 1485 aaKnown RBP eCLIP3.76□□□□□ -1.813e-7■■■□□ 16.2
CD46-219ENST00000636114 GAPVD1Q14C86 1478 aa3.76□□□□□ -1.81
CD46-219ENST00000636114 RRBP1Q9P2E9 1410 aaKnown RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 PDE2AO00408 941 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 LDHBP07195 334 aaKnown RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 ACPPP15309 386 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 RANGAP1P46060 587 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 EAPPQ56P03 285 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 CEP135Q66GS9 1140 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 CACTIN-AS1Q8N1I8 211 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms