RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 PRAMEF18Q5VWM3 479 aa20.15■□□□□ 0.82
PDLIM3-213ENST00000629667 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
PDLIM3-213ENST00000629667 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
PDLIM3-213ENST00000629667 MAP3K2Q9Y2U5 619 aa20.15■□□□□ 0.82
PDLIM3-213ENST00000629667 MED23Q9ULK4 1368 aa20.15■□□□□ 0.82
PDLIM3-213ENST00000629667 TBC1D8O95759 1140 aa20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 NF2P35240 595 aa20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 BSDC1Q9NW68 430 aaPredicted RBP20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 MINPP1Q9UNW1 487 aa20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 HPS5Q9UPZ3 1129 aa20.14■□□□□ 0.81
PDLIM3-213ENST00000629667 ZNF646O15015 1829 aaPredicted RBP20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 MYO3BQ8WXR4 1341 aa20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 WTIPA6NIX2 430 aaPredicted RBP20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 DACT2Q5SW24 774 aa20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 TTLL11Q8NHH1 800 aa20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 MXD3Q9BW11 206 aa20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 GREM2Q9H772 168 aa20.13■□□□□ 0.81
PDLIM3-213ENST00000629667 WNT10BO00744 389 aa20.12■□□□□ 0.81
PDLIM3-213ENST00000629667 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-213ENST00000629667 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
PDLIM3-213ENST00000629667 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
PDLIM3-213ENST00000629667 PI4KAP2A4QPH2 592 aa20.11■□□□□ 0.81
PDLIM3-213ENST00000629667 IGKV5-2P06315 115 aa20.11■□□□□ 0.81
PDLIM3-213ENST00000629667 STRIP1Q5VSL9 837 aa20.11■□□□□ 0.81
PDLIM3-213ENST00000629667 PI4KAP1Q8N8J0 262 aa20.11■□□□□ 0.81
PDLIM3-213ENST00000629667 COA1Q9GZY4 146 aa20.11■□□□□ 0.81
PDLIM3-213ENST00000629667 TM4SF4P48230 202 aa20.1■□□□□ 0.81
PDLIM3-213ENST00000629667 MKRN3Q13064 507 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-213ENST00000629667 SASH1O94885 1247 aa20.09■□□□□ 0.81
PDLIM3-213ENST00000629667 IGHMBP2P38935 993 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-213ENST00000629667 MMP14P50281 582 aa20.09■□□□□ 0.81
PDLIM3-213ENST00000629667 SREBF2Q12772 1141 aa20.09■□□□□ 0.81
PDLIM3-213ENST00000629667 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
PDLIM3-213ENST00000629667 GPR25O00155 361 aa20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 CWF19L2Q2TBE0 894 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 PRPF38BQ5VTL8 546 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 TTLL5Q6EMB2 1281 aa20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 ARMC9Q7Z3E5 817 aa20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
PDLIM3-213ENST00000629667 PRKG1Q13976 671 aa20.07■□□□□ 0.8
PDLIM3-213ENST00000629667 NOM1Q5C9Z4 860 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-213ENST00000629667 TXNRD3Q86VQ6 643 aa20.07■□□□□ 0.8
PDLIM3-213ENST00000629667 APOBEC3FQ8IUX4 373 aaKnown RBP20.07■□□□□ 0.8
PDLIM3-213ENST00000629667 KIAA0825Q8IV33 1275 aa20.07■□□□□ 0.8
PDLIM3-213ENST00000629667 ZNF804BA4D1E1 1349 aa20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 NEURL1BA8MQ27 555 aa20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 PTPN12Q05209 780 aaKnown RBP20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 UBE3BQ7Z3V4 1068 aa20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 ANKRD2Q9GZV1 360 aa20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
PDLIM3-213ENST00000629667 FBXO46Q6PJ61 603 aaPredicted RBP20.05■□□□□ 0.8
PDLIM3-213ENST00000629667 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
PDLIM3-213ENST00000629667 H7C1W4 665 aa20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 FKTNO75072 461 aa20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 ITGA6P23229 1130 aa20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 KCNJ4P48050 445 aa20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 GTF2IP78347 998 aa20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 ANGEL1Q9UNK9 670 aaKnown RBP20.04■□□□□ 0.8
PDLIM3-213ENST00000629667 KLRK1P26718 216 aa20.03■□□□□ 0.8
PDLIM3-213ENST00000629667 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-213ENST00000629667 CFHR5Q9BXR6 569 aa20.03■□□□□ 0.8
PDLIM3-213ENST00000629667 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.8
PDLIM3-213ENST00000629667 LDLRAD1Q5T700 205 aa20.02■□□□□ 0.8
PDLIM3-213ENST00000629667 SPRYD7Q5W111 196 aa20.02■□□□□ 0.8
PDLIM3-213ENST00000629667 COL1A1P02452 1464 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 ALDH1A1P00352 501 aa20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 G2E3Q7L622 706 aa20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 ZBED3Q96IU2 234 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 PLA2G12BQ9BX93 195 aa20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
PDLIM3-213ENST00000629667 CHRNDQ07001 517 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 GCKRQ14397 625 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 DLGAP5Q15398 846 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
PDLIM3-213ENST00000629667 SLC10A4Q96EP9 437 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 R3HDMLQ9H3Y0 253 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 CD209Q9NNX6 404 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 FZD1Q9UP38 647 aa20■□□□□ 0.79
PDLIM3-213ENST00000629667 MANSC4A6NHS7 340 aaPredicted RBP19.99■□□□□ 0.79
PDLIM3-213ENST00000629667 INHBEP58166 350 aa19.99■□□□□ 0.79
PDLIM3-213ENST00000629667 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
PDLIM3-213ENST00000629667 CACNA1FO60840 1977 aa19.98■□□□□ 0.79
PDLIM3-213ENST00000629667 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
PDLIM3-213ENST00000629667 CSF1RP07333 972 aa19.98■□□□□ 0.79
PDLIM3-213ENST00000629667 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
PDLIM3-213ENST00000629667 MYO1BO43795 1136 aa19.97■□□□□ 0.79
PDLIM3-213ENST00000629667 IFNL1Q8IU54 200 aa19.97■□□□□ 0.79
PDLIM3-213ENST00000629667 PPP2R3BQ9Y5P8 575 aa19.97■□□□□ 0.79
PDLIM3-213ENST00000629667 A0A1B0GUL6 1792 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 LAMB1P07942 1786 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 ZBTB48P10074 688 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 CASP7P55210 303 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 FLIIQ13045 1269 aa19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
PDLIM3-213ENST00000629667 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms