RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 BICDL1Q6ZP65 573 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
BRCC3-209ENST00000620502 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
BRCC3-209ENST00000620502 TSR2Q969E8 191 aaKnown RBP8.45□□□□□ -1.06
BRCC3-209ENST00000620502 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
BRCC3-209ENST00000620502 ZNF521Q96K83 1311 aa8.45□□□□□ -1.06
BRCC3-209ENST00000620502 A0A0G2JLW4 131 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 ERVV-1B6SEH8 477 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 KCNA3P22001 575 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 TGFB2P61812 414 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 TSPYL6Q8N831 410 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 DDX21Q9NR30 783 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRCC3-209ENST00000620502 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 BRCA1P38398 1863 aaKnown RBP8.44□□□□□ -1.06
BRCC3-209ENST00000620502 ANKRD31Q8N7Z5 1873 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
BRCC3-209ENST00000620502 DPEP1P16444 411 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 YBX3P16989 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
BRCC3-209ENST00000620502 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 PRR5LQ6MZQ0 368 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 SETDB2Q96T68 719 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 DBF4Q9UBU7 674 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-209ENST00000620502 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
BRCC3-209ENST00000620502 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
BRCC3-209ENST00000620502 MMP16P51512 607 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 GPR162Q16538 588 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 KIF6Q6ZMV9 814 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 ZNF34Q8IZ26 560 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 ANKLE1Q8NAG6 615 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 NIP7Q9Y221 180 aaKnown RBP eCLIP8.42□□□□□ -1.06
BRCC3-209ENST00000620502 DLEC1Q9Y238 1755 aa8.42□□□□□ -1.06
BRCC3-209ENST00000620502 ANKRD36CQ5JPF3 1778 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 ATP10DQ9P241 1426 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 C6orf229H3BNL8 230 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 VAMP4O75379 141 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 CHRNA5P30532 468 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
BRCC3-209ENST00000620502 AIMP1Q12904 312 aaKnown RBP8.41□□□□□ -1.06
BRCC3-209ENST00000620502 MTMR2Q13614 643 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
BRCC3-209ENST00000620502 TWISTNBQ3B726 338 aaPredicted RBP8.41□□□□□ -1.06
BRCC3-209ENST00000620502 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 PHAXQ9H814 394 aaKnown RBP8.41□□□□□ -1.06
BRCC3-209ENST00000620502 HYPKQ9NX55 129 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 WWC3Q9ULE0 1092 aa8.41□□□□□ -1.06
BRCC3-209ENST00000620502 UBN2Q6ZU65 1347 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
BRCC3-209ENST00000620502 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
BRCC3-209ENST00000620502 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
BRCC3-209ENST00000620502 CCDC30Q5VVM6 783 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 SUSD4Q5VX71 490 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.06
BRCC3-209ENST00000620502 CNBD1Q8NA66 436 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 PLBD2Q8NHP8 589 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 MYH16Q9H6N6 1097 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
BRCC3-209ENST00000620502 ARFGEF2Q9Y6D5 1785 aa8.4□□□□□ -1.07
BRCC3-209ENST00000620502 COL11A2P13942 1736 aaPredicted RBP8.4□□□□□ -1.07
BRCC3-209ENST00000620502 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 KLRG2A4D1S0 409 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-209ENST00000620502 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 FAM177BA6PVY3 158 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
BRCC3-209ENST00000620502 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 GPTP24298 496 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 TCIRG1Q13488 830 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 TRMT2AQ8IZ69 625 aaKnown RBP8.39□□□□□ -1.07
BRCC3-209ENST00000620502 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-209ENST00000620502 CHMP4AQ9BY43 222 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
BRCC3-209ENST00000620502 TNRC6CQ9HCJ0 1690 aaKnown RBP8.38□□□□□ -1.07
BRCC3-209ENST00000620502 H0YIN7 160 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 LILRB3O75022 631 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 NTSR2O95665 410 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 PDE6BP35913 854 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 ST5P78524 1137 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 QPCTQ16769 361 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 G2E3Q7L622 706 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 NLRP10Q86W26 655 aa8.38□□□□□ -1.07
BRCC3-209ENST00000620502 BCS1LQ9Y276 419 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms