RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 FSD2A1L4K1 749 aa23.04■■□□□ 1.28
FGFR1-241ENST00000619564 UBE4AQ14139 1066 aa23.04■■□□□ 1.28
FGFR1-241ENST00000619564 PSMA7O14818 248 aa23.04■■□□□ 1.28
FGFR1-241ENST00000619564 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
FGFR1-241ENST00000619564 RBM17Q96I25 401 aaKnown RBP23.04■■□□□ 1.28
FGFR1-241ENST00000619564 PUS7Q96PZ0 661 aaKnown RBP23.04■■□□□ 1.28
FGFR1-241ENST00000619564 IMPG2Q9BZV3 1241 aa23.04■■□□□ 1.28
FGFR1-241ENST00000619564 LMAN1P49257 510 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 NCBP1Q09161 790 aaKnown RBP23.03■■□□□ 1.28
FGFR1-241ENST00000619564 SNW1Q13573 536 aaKnown RBP23.03■■□□□ 1.28
FGFR1-241ENST00000619564 TRIM75PA6NK02 468 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 TCHPQ9BT92 498 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 TRAPPC3LQ5T215 181 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
FGFR1-241ENST00000619564 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 ABCC1P33527 1531 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
FGFR1-241ENST00000619564 HOMER2Q9NSB8 354 aa23.03■■□□□ 1.28
FGFR1-241ENST00000619564 KRT79Q5XKE5 535 aa23.02■■□□□ 1.28
FGFR1-241ENST00000619564 TSNARE1Q96NA8 513 aa23.02■■□□□ 1.28
FGFR1-241ENST00000619564 TNNI2P48788 182 aa23.02■■□□□ 1.28
FGFR1-241ENST00000619564 UBASH3AP57075 661 aa23.02■■□□□ 1.28
FGFR1-241ENST00000619564 LRRC45Q96CN5 670 aa23.02■■□□□ 1.28
FGFR1-241ENST00000619564 GNPATO15228 680 aa23.02■■□□□ 1.27
FGFR1-241ENST00000619564 CYLC1P35663 651 aaPredicted RBP23.02■■□□□ 1.27
FGFR1-241ENST00000619564 SBNO2Q9Y2G9 1366 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 RNMTO43148 476 aaKnown RBP23.01■■□□□ 1.27
FGFR1-241ENST00000619564 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
FGFR1-241ENST00000619564 KIAA0753Q2KHM9 967 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
FGFR1-241ENST00000619564 ERICH4A6NGS2 130 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 CGNQ9P2M7 1197 aaKnown RBP23.01■■□□□ 1.27
FGFR1-241ENST00000619564 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 TFCP2Q12800 502 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 EYA1Q99502 592 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 CDCA7Q9BWT1 371 aaPredicted RBP23.01■■□□□ 1.27
FGFR1-241ENST00000619564 KLHL40Q2TBA0 621 aa23.01■■□□□ 1.27
FGFR1-241ENST00000619564 HSPA2P54652 639 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 MAP3K9P80192 1104 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 IP6K1Q92551 441 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 ZFYVE9O95405 1425 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 HOXC9P31274 260 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 KRT2P35908 639 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 BTG4Q9NY30 223 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 GIMAP6Q6P9H5 292 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 DDX12PQ92771 950 aa23■■□□□ 1.27
FGFR1-241ENST00000619564 GNA11P29992 359 aa22.99■■□□□ 1.27
FGFR1-241ENST00000619564 IKBKGQ9Y6K9 419 aa22.99■■□□□ 1.27
FGFR1-241ENST00000619564 MARCKSP29966 332 aaPredicted RBP22.99■■□□□ 1.27
FGFR1-241ENST00000619564 GIGYF2Q6Y7W6 1299 aaKnown RBP22.99■■□□□ 1.27
FGFR1-241ENST00000619564 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
FGFR1-241ENST00000619564 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
FGFR1-241ENST00000619564 TTC12Q9H892 705 aaPredicted RBP22.99■■□□□ 1.27
FGFR1-241ENST00000619564 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
FGFR1-241ENST00000619564 GNG11P61952 73 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 MRVI1Q9Y6F6 885 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 SOS1Q07889 1333 aaPredicted RBP22.98■■□□□ 1.27
FGFR1-241ENST00000619564 FAM13AO94988 1023 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 SSX2IPQ9Y2D8 614 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 DENND2AQ9ULE3 1009 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 CNBD1Q8NA66 436 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 BBXQ8WY36 941 aaPredicted RBP22.98■■□□□ 1.27
FGFR1-241ENST00000619564 CCDC175P0C221 793 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 MAATS1Q7Z4T9 603 aa22.98■■□□□ 1.27
FGFR1-241ENST00000619564 DHX58Q96C10 678 aa22.97■■□□□ 1.27
FGFR1-241ENST00000619564 SH2D4AQ9H788 454 aa22.97■■□□□ 1.27
FGFR1-241ENST00000619564 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
FGFR1-241ENST00000619564 ZNF354CQ86Y25 554 aa22.97■■□□□ 1.27
FGFR1-241ENST00000619564 KCNA6P17658 529 aa22.97■■□□□ 1.27
FGFR1-241ENST00000619564 HCLS1P14317 486 aaPredicted RBP22.96■■□□□ 1.27
FGFR1-241ENST00000619564 PRPHP41219 470 aa22.96■■□□□ 1.27
FGFR1-241ENST00000619564 PSMD1Q99460 953 aa22.96■■□□□ 1.27
FGFR1-241ENST00000619564 CEP85Q6P2H3 762 aa22.96■■□□□ 1.27
FGFR1-241ENST00000619564 GTPBP4Q9BZE4 634 aaKnown RBP22.96■■□□□ 1.27
FGFR1-241ENST00000619564 SPTLC2O15270 562 aa22.96■■□□□ 1.27
FGFR1-241ENST00000619564 MICALCLQ6ZW33 695 aa22.96■■□□□ 1.27
FGFR1-241ENST00000619564 ZSCAN23Q3MJ62 389 aa22.95■■□□□ 1.27
FGFR1-241ENST00000619564 PARP10Q53GL7 1025 aa22.95■■□□□ 1.27
FGFR1-241ENST00000619564 CTR9Q6PD62 1173 aa22.95■■□□□ 1.27
FGFR1-241ENST00000619564 F13A1P00488 732 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 CKAP4Q07065 602 aaKnown RBP22.95■■□□□ 1.26
FGFR1-241ENST00000619564 STK32BQ9NY57 414 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 VAMP4O75379 141 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 HS2ST1Q7LGA3 356 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 BICC1Q9H694 974 aaKnown RBP22.95■■□□□ 1.26
FGFR1-241ENST00000619564 RBM28Q9NW13 759 aaKnown RBP22.95■■□□□ 1.26
FGFR1-241ENST00000619564 RAD50Q92878 1312 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 ANO6Q4KMQ2 910 aa22.95■■□□□ 1.26
FGFR1-241ENST00000619564 DDX21Q9NR30 783 aaKnown RBP eCLIP22.95■■□□□ 1.26
FGFR1-241ENST00000619564 YTHDC2Q9H6S0 1430 aaKnown RBP22.95■■□□□ 1.26
FGFR1-241ENST00000619564 EIF2AK4Q9P2K8 1649 aaKnown RBP22.94■■□□□ 1.26
FGFR1-241ENST00000619564 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
FGFR1-241ENST00000619564 CCDC171Q6TFL3 1326 aa22.94■■□□□ 1.26
FGFR1-241ENST00000619564 GRIPAP1Q4V328 841 aa22.94■■□□□ 1.26
FGFR1-241ENST00000619564 TRAPPC8Q9Y2L5 1435 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms