RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 VPS18Q9P253 973 aa16.92■□□□□ 0.3
SYNRG-225ENST00000619541 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
SYNRG-225ENST00000619541 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
SYNRG-225ENST00000619541 GOLPH3LQ9H4A5 285 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 CCDC9Q9Y3X0 531 aaKnown RBP16.91■□□□□ 0.3
SYNRG-225ENST00000619541 A0A1B0GVL5 298 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
SYNRG-225ENST00000619541 SASH3O75995 380 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 LTN1O94822 1766 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 GNG11P61952 73 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 RBM43Q6ZSC3 357 aaKnown RBP16.91■□□□□ 0.3
SYNRG-225ENST00000619541 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 AOX1Q06278 1338 aa16.91■□□□□ 0.3
SYNRG-225ENST00000619541 CTAGE5O15320 804 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 PHACTR2O75167 634 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 ANXA1P04083 346 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 CCDC150Q8NCX0 1101 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
SYNRG-225ENST00000619541 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 SERPINC1P01008 464 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 EFCC1Q9HA90 598 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
SYNRG-225ENST00000619541 CCT2P78371 535 aaKnown RBP16.89■□□□□ 0.3
SYNRG-225ENST00000619541 NECTIN1Q15223 517 aa16.89■□□□□ 0.3
SYNRG-225ENST00000619541 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.3
SYNRG-225ENST00000619541 NOM1Q5C9Z4 860 aaKnown RBP16.89■□□□□ 0.3
SYNRG-225ENST00000619541 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.3
SYNRG-225ENST00000619541 IL17RAQ96F46 866 aa16.89■□□□□ 0.3
SYNRG-225ENST00000619541 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
SYNRG-225ENST00000619541 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
SYNRG-225ENST00000619541 ZRANB2O95218 330 aaKnown RBP eCLIP16.89■□□□□ 0.29
SYNRG-225ENST00000619541 DPCR1Q3MIW9 517 aa16.89■□□□□ 0.29
SYNRG-225ENST00000619541 CFAP100Q494V2 611 aa16.89■□□□□ 0.29
SYNRG-225ENST00000619541 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 USP28Q96RU2 1077 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 MPRIPQ6WCQ1 1025 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
SYNRG-225ENST00000619541 CC2D1AQ6P1N0 951 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-225ENST00000619541 RESTQ13127 1097 aa16.87■□□□□ 0.29
SYNRG-225ENST00000619541 KCNQ3O43525 872 aa16.87■□□□□ 0.29
SYNRG-225ENST00000619541 CCDC93Q567U6 631 aa16.87■□□□□ 0.29
SYNRG-225ENST00000619541 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-225ENST00000619541 TADA3O75528 432 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 TTC31Q49AM3 519 aaPredicted RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 SRLQ86TD4 932 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 TOB2Q14106 344 aaPredicted RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 MUM1L1Q5H9M0 696 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 Q6ZUG5 572 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 GOLGA5Q8TBA6 731 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 C9orf78Q9NZ63 289 aaPredicted RBP16.86■□□□□ 0.29
SYNRG-225ENST00000619541 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 FAM160A1Q05DH4 1040 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 E2F4Q16254 413 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 PARD6BQ9BYG5 372 aa16.86■□□□□ 0.29
SYNRG-225ENST00000619541 EFCAB8A8MWE9 144 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 TPM1P09493 284 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 PPP2R3AQ06190 1150 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 ICE2Q659A1 982 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 MST1RQ04912 1400 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 KARSQ15046 597 aaKnown RBP16.85■□□□□ 0.29
SYNRG-225ENST00000619541 STK38Q15208 465 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 CCDC158Q5M9N0 1113 aa16.85■□□□□ 0.29
SYNRG-225ENST00000619541 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
SYNRG-225ENST00000619541 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
SYNRG-225ENST00000619541 PUF60Q9UHX1 559 aaKnown RBP16.85■□□□□ 0.29
SYNRG-225ENST00000619541 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-225ENST00000619541 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-225ENST00000619541 PDE11AQ9HCR9 933 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 CCP110O43303 1012 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
SYNRG-225ENST00000619541 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 PI4KAP2A4QPH2 592 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 APPP05067 770 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 ACTN2P35609 894 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
SYNRG-225ENST00000619541 TTLL5Q6EMB2 1281 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 FOXR1Q6PIV2 292 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 PI4KAP1Q8N8J0 262 aa16.84■□□□□ 0.29
SYNRG-225ENST00000619541 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
SYNRG-225ENST00000619541 A0A1B0GUL7 405 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms