RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
COPS7B-223ENST00000611614 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
COPS7B-223ENST00000611614 MBD3O95983 291 aa16.55■□□□□ 0.24
COPS7B-223ENST00000611614 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
COPS7B-223ENST00000611614 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
COPS7B-223ENST00000611614 PROM2Q8N271 834 aa16.55■□□□□ 0.24
COPS7B-223ENST00000611614 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
COPS7B-223ENST00000611614 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 NECTIN1Q15223 517 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 CDC5LQ99459 802 aaKnown RBP16.54■□□□□ 0.24
COPS7B-223ENST00000611614 ZSWIM6Q9HCJ5 1215 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 MCM5P33992 734 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 FAM227BQ96M60 508 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 JAKMIP1Q96N16 626 aaKnown RBP16.54■□□□□ 0.24
COPS7B-223ENST00000611614 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
COPS7B-223ENST00000611614 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
COPS7B-223ENST00000611614 MYH3P11055 1940 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 TIMM10P62072 90 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 SLC10A5Q5PT55 438 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 MAP4K1Q92918 833 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 PDRG1Q9NUG6 133 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 NOL7Q9UMY1 257 aaKnown RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 CYP46A1Q9Y6A2 500 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 ATP5JP18859 108 aa16.53■□□□□ 0.24
COPS7B-223ENST00000611614 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
COPS7B-223ENST00000611614 RTL9Q8NET4 1388 aa16.52■□□□□ 0.24
COPS7B-223ENST00000611614 CPA1P15085 419 aa16.52■□□□□ 0.24
COPS7B-223ENST00000611614 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
COPS7B-223ENST00000611614 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
COPS7B-223ENST00000611614 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.24
COPS7B-223ENST00000611614 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
COPS7B-223ENST00000611614 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.23
COPS7B-223ENST00000611614 SF3B3Q15393 1217 aaKnown RBP16.52■□□□□ 0.23
COPS7B-223ENST00000611614 CREB3L3Q68CJ9 461 aa16.52■□□□□ 0.23
COPS7B-223ENST00000611614 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.23
COPS7B-223ENST00000611614 KCNJ4P48050 445 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 NFIXQ14938 502 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 LRSAM1Q6UWE0 723 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
COPS7B-223ENST00000611614 ATP2B3Q16720 1220 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 SH2B1Q9NRF2 756 aaPredicted RBP16.51■□□□□ 0.23
COPS7B-223ENST00000611614 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
COPS7B-223ENST00000611614 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
COPS7B-223ENST00000611614 GYS1P13807 737 aa16.5■□□□□ 0.23
COPS7B-223ENST00000611614 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
COPS7B-223ENST00000611614 LARP6Q9BRS8 491 aaKnown RBP16.5■□□□□ 0.23
COPS7B-223ENST00000611614 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
COPS7B-223ENST00000611614 ZNF609O15014 1411 aa16.5■□□□□ 0.23
COPS7B-223ENST00000611614 PDE8BO95263 885 aa16.5■□□□□ 0.23
COPS7B-223ENST00000611614 SLC27A2O14975 620 aa16.49■□□□□ 0.23
COPS7B-223ENST00000611614 LARGE1O95461 756 aa16.49■□□□□ 0.23
COPS7B-223ENST00000611614 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
COPS7B-223ENST00000611614 PSMA5P28066 241 aa16.49■□□□□ 0.23
COPS7B-223ENST00000611614 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
COPS7B-223ENST00000611614 DNAJC2Q99543 621 aaKnown RBP16.49■□□□□ 0.23
COPS7B-223ENST00000611614 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 STX6O43752 255 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 SYT1P21579 422 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 C4AP0C0L4 1744 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
COPS7B-223ENST00000611614 IFIT1P09914 478 aaKnown RBP16.47■□□□□ 0.23
COPS7B-223ENST00000611614 ST5P78524 1137 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
COPS7B-223ENST00000611614 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 HAUS7Q99871 368 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 CCDC39Q9UFE4 941 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 RFX7Q2KHR2 1363 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 DDX46Q7L014 1031 aaKnown RBP16.47■□□□□ 0.23
COPS7B-223ENST00000611614 USP48Q86UV5 1035 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 CCDC83Q8IWF9 413 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
COPS7B-223ENST00000611614 ZNF827Q17R98 1081 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 LPIN2Q92539 896 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.23
COPS7B-223ENST00000611614 SYCE3A1L190 88 aa16.46■□□□□ 0.23
COPS7B-223ENST00000611614 SERPINB2P05120 415 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms