RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NCOA1Q15788 1441 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 MCTP1Q6DN14 999 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 TREML1Q86YW5 311 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 KRTAP1-3Q8IUG1 177 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 CLUAP1Q96AJ1 413 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 SPACA7Q96KW9 195 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 INSRP06213 1382 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 TONSLQ96HA7 1378 aa5.27□□□□□ -1.57
HMGB1P50-201ENST00000605814 ARID4BQ4LE39 1312 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 TIAM1Q13009 1591 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 UACAQ9BZF9 1416 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 BTBD11A6QL63 1104 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 J3QW42 95 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 DLL1O00548 723 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 DEAF1O75398 565 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 IRAK1P51617 712 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 SLC51AQ86UW1 340 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 FAM200AQ8TCP9 573 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 MUC3BQ9H195 1237 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 RRAGDQ9NQL2 400 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 ISY1Q9ULR0 285 aaKnown RBP5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 LAS1LQ9Y4W2 734 aaKnown RBP5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 TOP2BQ02880 1626 aa5.26□□□□□ -1.57
HMGB1P50-201ENST00000605814 F8W735 103 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 RFX1P22670 979 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 GRNP28799 593 aaKnown RBP5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 FGD1P98174 961 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 AAMPQ13685 434 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 CCDC184Q52MB2 194 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 FAM117BQ6P1L5 589 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 CACTIN-AS1Q8N1I8 211 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 AGGF1Q8N302 714 aaeCLIP5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 MYO19Q96H55 970 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 MAP7D2Q96T17 732 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 CEP41Q9BYV8 373 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 PNNQ9H307 717 aaKnown RBP5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 MRS2Q9HD23 443 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 STOML1Q9UBI4 398 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 PRDM4Q9UKN5 801 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 BIVM-ERCC5R4GMW8 1640 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 CCDC7Q96M83 1385 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 LRRC9Q6ZRR7 1453 aa5.25□□□□□ -1.57
HMGB1P50-201ENST00000605814 FSD2A1L4K1 749 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 DHX15O43143 795 aaKnown RBP5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 MMP20O60882 483 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 HSPA5P11021 654 aaKnown RBP5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 WEE1P30291 646 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 GRIK1P39086 918 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 DZIP1LQ8IYY4 767 aaKnown RBP5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 FAM13BQ9NYF5 915 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 PPME1Q9Y570 386 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 KTN1Q86UP2 1357 aaKnown RBP5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 CCDC18Q5T9S5 1454 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 ARHGAP35Q9NRY4 1499 aa5.24□□□□□ -1.57
HMGB1P50-201ENST00000605814 AKNAQ7Z591 1439 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 SMNDC1O75940 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 EGFRP00533 1210 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 SOX18P35713 384 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 SCNN1AP37088 669 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 TXKP42681 527 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 RBM10P98175 930 aaKnown RBP5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 ACAD11Q709F0 780 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 TMEM130Q8N3G9 435 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 PNISRQ8TF01 805 aaKnown RBP5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 LACRTQ9GZZ8 138 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 GOLGA2P5Q9HBQ8 144 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 TRIM33Q9UPN9 1127 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 LRPPRCP42704 1394 aaKnown RBP5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 ZMYM4Q5VZL5 1548 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 HFM1A2PYH4 1435 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 SPATA31E1Q6ZUB1 1445 aa5.23□□□□□ -1.57
HMGB1P50-201ENST00000605814 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 LINC01387J3KSC0 135 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 SART1O43290 800 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 COBLO75128 1261 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 IGLV1-40P01703 118 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 NCLP19338 710 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 BRD2P25440 801 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 CDC25BP30305 580 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 RRP1P56182 461 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 HYAL2Q12891 473 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 TTC39BQ5VTQ0 682 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 ILDR2Q71H61 639 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 NLRP13Q86W25 1043 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 FAM9BQ8IZU0 186 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 PIK3R5Q8WYR1 880 aa5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 UTP4Q969X6 686 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 HIRIP3Q9BW71 556 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 FNDC3AQ9Y2H6 1198 aaKnown RBP5.22□□□□□ -1.57
HMGB1P50-201ENST00000605814 OPLAHO14841 1288 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 FRAT2O75474 233 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 SETDB1Q15047 1291 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 CEP135Q66GS9 1140 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 TXNDC11Q6PKC3 985 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 MTERF4Q7Z6M4 381 aaKnown RBP5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 LRFN2Q9ULH4 789 aa5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 NOVA2Q9UNW9 492 aaKnown RBP5.21□□□□□ -1.58
HMGB1P50-201ENST00000605814 CCDC144AA2RUR9 1427 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms