RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SIK1P57059 783 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 RGL4Q8IZJ4 473 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 TMEM130Q8N3G9 435 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 PLD4Q96BZ4 506 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 KRTAP4-12Q9BQ66 201 aa7.55□□□□□ -1.2
LSM1P2-201ENST00000604911 J3QW42 95 aa7.54□□□□□ -1.2
LSM1P2-201ENST00000604911 TAF3Q5VWG9 929 aa7.54□□□□□ -1.2
LSM1P2-201ENST00000604911 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
LSM1P2-201ENST00000604911 CMTR1Q8N1G2 835 aaKnown RBP7.54□□□□□ -1.2
LSM1P2-201ENST00000604911 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
LSM1P2-201ENST00000604911 PSAPP07602 524 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 OCLNQ16625 522 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 SWI5Q1ZZU3 235 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 Q6ZS46 218 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 PDCL3Q9H2J4 239 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 AKTIPQ9H8T0 292 aa7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 SRA1Q9HD15 236 aaKnown RBP7.53□□□□□ -1.2
LSM1P2-201ENST00000604911 F8W735 103 aaPredicted RBP7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 FAM26DQ5JW98 314 aa7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 TMTC2Q8N394 836 aa7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 IL22RA1Q8N6P7 574 aa7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 MTMR7Q9Y216 660 aa7.52□□□□□ -1.21
LSM1P2-201ENST00000604911 ALX3O95076 343 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 CC2D1BQ5T0F9 858 aaKnown RBP7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 GDF6Q6KF10 455 aaPredicted RBP7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 SLC51AQ86UW1 340 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 MAP4K3Q8IVH8 894 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 COL26A1Q96A83 441 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 ZNF830Q96NB3 372 aaPredicted RBP7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 SAP130Q9H0E3 1048 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 ZMIZ1Q9ULJ6 1067 aa7.51□□□□□ -1.21
LSM1P2-201ENST00000604911 E9PSI1 815 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 GHRHP01286 108 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 CDCA8Q53HL2 280 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 UTP14CQ5TAP6 766 aaKnown RBP7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 NLRP13Q86W25 1043 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 SMAP1Q8IYB5 467 aaPredicted RBP7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 PRIMPOLQ96LW4 560 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 TMEM51Q9NW97 253 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 WASHC2AQ641Q2 1341 aa7.5□□□□□ -1.21
LSM1P2-201ENST00000604911 TNFRSF10BO14763 440 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 TM4SF5O14894 197 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 RFX1P22670 979 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 C16orf46Q6P387 395 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
LSM1P2-201ENST00000604911 TCERG1O14776 1098 aaKnown RBP7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 NRDCO43847 1150 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 PRMT3O60678 531 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 FSTP19883 344 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 RGS3P49796 1198 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 TSHZ1Q6ZSZ6 1077 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 OR13H1Q8NG92 308 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 DCAF11Q8TEB1 546 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 ZNF777Q9ULD5 760 aaPredicted RBP7.48□□□□□ -1.21
LSM1P2-201ENST00000604911 LOC102724159A0A0B4J2E5 919 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 SRPK2P78362 688 aaKnown RBP7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 PWP2Q15269 919 aaKnown RBP7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 HSP90AB3PQ58FF7 597 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 CARD10Q9BWT7 1032 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 MUC3BQ9H195 1237 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 YY1AP1Q9H869 796 aa7.47□□□□□ -1.21
LSM1P2-201ENST00000604911 CALRP27797 417 aaKnown RBP7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 SPTY2D1Q68D10 685 aaPredicted RBP7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 CAPN12Q6ZSI9 719 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 EGFL6Q8IUX8 553 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 GALNT11Q8NCW6 608 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 STK32AQ8WU08 396 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 PPME1Q9Y570 386 aa7.46□□□□□ -1.22
LSM1P2-201ENST00000604911 UBAP1LF5GYI3 381 aa7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 TNNT2P45379 298 aaPredicted RBP7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 CD97P48960 835 aa7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 AGGF1Q8N302 714 aaeCLIP7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 UBL7Q96S82 380 aaPredicted RBP7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
LSM1P2-201ENST00000604911 KIF4AO95239 1232 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 RALBP1Q15311 655 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 ADAMTSL4Q6UY14 1074 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 RINLQ6ZS11 566 aa7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
LSM1P2-201ENST00000604911 PIK3R5Q8WYR1 880 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms