RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 CARD14Q9BXL6 1004 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 DNAI1Q9UI46 699 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
SYMPK-215ENST00000600237 TUBB4BP68371 445 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 GSTO1P78417 241 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 ATL3Q6DD88 541 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CTAGE15A4D2H0 777 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 PSMA7O14818 248 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CCDC172P0C7W6 258 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CTAGE8P0CG41 777 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CTAGE6Q86UF2 777 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 CTAGE4Q8IX94 777 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-215ENST00000600237 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
SYMPK-215ENST00000600237 NIP7Q9Y221 180 aaKnown RBP eCLIP16.57■□□□□ 0.24
SYMPK-215ENST00000600237 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 PRC1O43663 620 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
SYMPK-215ENST00000600237 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
SYMPK-215ENST00000600237 TRAF1Q13077 416 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
SYMPK-215ENST00000600237 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 MAST1Q9Y2H9 1570 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 BRAPQ7Z569 592 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
SYMPK-215ENST00000600237 PZPP20742 1482 aa16.56■□□□□ 0.24
SYMPK-215ENST00000600237 LMAN1P49257 510 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 KRI1Q8N9T8 703 aaKnown RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 STAT6P42226 847 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 SYT1P21579 422 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 CYP7A1P22680 504 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
SYMPK-215ENST00000600237 NYXQ9GZU5 481 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 BTG4Q9NY30 223 aa16.55■□□□□ 0.24
SYMPK-215ENST00000600237 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 SPAG5Q96R06 1193 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 AFMP43652 599 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 RNF187Q5TA31 235 aaPredicted RBP16.54■□□□□ 0.24
SYMPK-215ENST00000600237 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
SYMPK-215ENST00000600237 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
SYMPK-215ENST00000600237 CALM1P0DP23 149 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 CALM2P0DP24 149 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 CALM3P0DP25 149 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 GNAT2P19087 354 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
SYMPK-215ENST00000600237 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 RUFY3Q7L099 469 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
SYMPK-215ENST00000600237 TBCAO75347 108 aaKnown RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 CALML3P27482 149 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 COL17A1Q9UMD9 1497 aaPredicted RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 MYO1BO43795 1136 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 CEP112Q8N8E3 955 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 MARCKSP29966 332 aaPredicted RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 SPECC1LQ69YQ0 1117 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 INSRP06213 1382 aa16.53■□□□□ 0.24
SYMPK-215ENST00000600237 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
SYMPK-215ENST00000600237 SEC24BO95487 1268 aa16.52■□□□□ 0.24
SYMPK-215ENST00000600237 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.24
SYMPK-215ENST00000600237 BBXQ8WY36 941 aaPredicted RBP16.52■□□□□ 0.24
SYMPK-215ENST00000600237 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
SYMPK-215ENST00000600237 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
SYMPK-215ENST00000600237 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
SYMPK-215ENST00000600237 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
SYMPK-215ENST00000600237 HSF2BPO75031 334 aa16.52■□□□□ 0.23
SYMPK-215ENST00000600237 TUBBP07437 444 aa16.52■□□□□ 0.23
SYMPK-215ENST00000600237 CTNNA2P26232 953 aa16.52■□□□□ 0.23
SYMPK-215ENST00000600237 KRT83P78385 493 aa16.52■□□□□ 0.23
SYMPK-215ENST00000600237 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.23
SYMPK-215ENST00000600237 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 TACC1O75410 805 aa16.51■□□□□ 0.23
SYMPK-215ENST00000600237 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms