RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PARP3Q9Y6F1 533 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 MYH7P12883 1935 aa13.79□□□□□ -0.2
SMAD4-205ENST00000588745 MCCP23508 829 aa13.78□□□□□ -0.2
SMAD4-205ENST00000588745 ZAP70P43403 619 aa13.78□□□□□ -0.2
SMAD4-205ENST00000588745 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMAD4-205ENST00000588745 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
SMAD4-205ENST00000588745 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
SMAD4-205ENST00000588745 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
SMAD4-205ENST00000588745 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
SMAD4-205ENST00000588745 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
SMAD4-205ENST00000588745 HOXA10P31260 410 aaPredicted RBP13.77□□□□□ -0.21
SMAD4-205ENST00000588745 BECN1Q14457 450 aa13.77□□□□□ -0.21
SMAD4-205ENST00000588745 PI16Q6UXB8 463 aa13.77□□□□□ -0.21
SMAD4-205ENST00000588745 KIAA1211Q6ZU35 1233 aa13.77□□□□□ -0.21
SMAD4-205ENST00000588745 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
SMAD4-205ENST00000588745 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
SMAD4-205ENST00000588745 LRRFIP1Q32MZ4 808 aaKnown RBP13.76□□□□□ -0.21
SMAD4-205ENST00000588745 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
SMAD4-205ENST00000588745 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
SMAD4-205ENST00000588745 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
SMAD4-205ENST00000588745 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
SMAD4-205ENST00000588745 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
SMAD4-205ENST00000588745 HSPA4P34932 840 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 KCNJ4P48050 445 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 BCAMP50895 628 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 ANAPC15P60006 121 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
SMAD4-205ENST00000588745 SPATA5Q8NB90 893 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 LTBP1Q14766 1721 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 MYH13Q9UKX3 1938 aa13.75□□□□□ -0.21
SMAD4-205ENST00000588745 CHGBP05060 677 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-205ENST00000588745 PDE6BP35913 854 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 RABEP1Q15276 862 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 ZMYM1Q5SVZ6 1142 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-205ENST00000588745 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-205ENST00000588745 XDHP47989 1333 aa13.74□□□□□ -0.21
SMAD4-205ENST00000588745 COL1A1P02452 1464 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-205ENST00000588745 MYO5AQ9Y4I1 1855 aaKnown RBP13.73□□□□□ -0.21
SMAD4-205ENST00000588745 BBOX1O75936 387 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 NPR1P16066 1061 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 GYG1P46976 350 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 PTH1RQ03431 593 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 SNX21Q969T3 373 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD4-205ENST00000588745 PIH1D3Q9NQM4 214 aaKnown RBP13.73□□□□□ -0.21
SMAD4-205ENST00000588745 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
SMAD4-205ENST00000588745 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 IRS2Q9Y4H2 1338 aa13.73□□□□□ -0.21
SMAD4-205ENST00000588745 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
SMAD4-205ENST00000588745 SRGNP10124 158 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 KLRK1P26718 216 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 ZSCAN25Q6NSZ9 544 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 FAM84BQ96KN1 310 aaPredicted RBP13.72□□□□□ -0.21
SMAD4-205ENST00000588745 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
SMAD4-205ENST00000588745 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 MAST3O60307 1309 aa13.72□□□□□ -0.21
SMAD4-205ENST00000588745 PPEF1O14829 653 aaPredicted RBP13.71□□□□□ -0.21
SMAD4-205ENST00000588745 SEMA3EO15041 775 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 SLC4A3P48751 1232 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 VPS37DQ86XT2 251 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 APPBP2Q92624 585 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
SMAD4-205ENST00000588745 CACNA1SQ13698 1873 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 MAST2Q6P0Q8 1798 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.22
SMAD4-205ENST00000588745 ZBTB22O15209 634 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 IDH1O75874 414 aaKnown RBP13.71□□□□□ -0.22
SMAD4-205ENST00000588745 ADD2P35612 726 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 GPSM2P81274 684 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 SLFNL1Q499Z3 407 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 MASTLQ96GX5 879 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.22
SMAD4-205ENST00000588745 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.22
SMAD4-205ENST00000588745 DLEC1Q9Y238 1755 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 DUOX1Q9NRD9 1551 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 M0R2C6 588 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 ATP2B4P23634 1241 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 HIBADHP31937 336 aaKnown RBP13.7□□□□□ -0.22
SMAD4-205ENST00000588745 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
SMAD4-205ENST00000588745 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
SMAD4-205ENST00000588745 C15orf52Q6ZUT6 534 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms