RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 GPR162Q16538 588 aa17.61■□□□□ 0.41
MKS1-211ENST00000581761 SLC10A5Q5PT55 438 aa17.61■□□□□ 0.41
MKS1-211ENST00000581761 NBPF5PQ86XG9 351 aaPredicted RBP17.61■□□□□ 0.41
MKS1-211ENST00000581761 CDC5LQ99459 802 aaKnown RBP17.61■□□□□ 0.41
MKS1-211ENST00000581761 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
MKS1-211ENST00000581761 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
MKS1-211ENST00000581761 SLC5A1P13866 664 aa17.6■□□□□ 0.41
MKS1-211ENST00000581761 NEK4P51957 841 aa17.6■□□□□ 0.41
MKS1-211ENST00000581761 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
MKS1-211ENST00000581761 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
MKS1-211ENST00000581761 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
MKS1-211ENST00000581761 KCNJ4P48050 445 aa17.59■□□□□ 0.41
MKS1-211ENST00000581761 HELBQ8NG08 1087 aaPredicted RBP17.59■□□□□ 0.41
MKS1-211ENST00000581761 LPIN2Q92539 896 aa17.59■□□□□ 0.41
MKS1-211ENST00000581761 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
MKS1-211ENST00000581761 RBM8AQ9Y5S9 174 aaKnown RBP17.59■□□□□ 0.41
MKS1-211ENST00000581761 PARP3Q9Y6F1 533 aa17.59■□□□□ 0.41
MKS1-211ENST00000581761 FGFR2P21802 821 aa17.58■□□□□ 0.4
MKS1-211ENST00000581761 FKBP4Q02790 459 aaKnown RBP eCLIP17.58■□□□□ 0.4
MKS1-211ENST00000581761 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.4
MKS1-211ENST00000581761 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.4
MKS1-211ENST00000581761 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
MKS1-211ENST00000581761 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
MKS1-211ENST00000581761 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
MKS1-211ENST00000581761 CD2APQ9Y5K6 639 aa17.58■□□□□ 0.4
MKS1-211ENST00000581761 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
MKS1-211ENST00000581761 MCM2P49736 904 aa17.57■□□□□ 0.4
MKS1-211ENST00000581761 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
MKS1-211ENST00000581761 MCMDC2Q4G0Z9 681 aa17.57■□□□□ 0.4
MKS1-211ENST00000581761 RASEFQ8IZ41 740 aa17.57■□□□□ 0.4
MKS1-211ENST00000581761 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
MKS1-211ENST00000581761 ZNF512BQ96KM6 892 aaPredicted RBP17.57■□□□□ 0.4
MKS1-211ENST00000581761 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
MKS1-211ENST00000581761 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 TAF5LO75529 589 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 SERPINB2P05120 415 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 UQCRFS1P1P0C7P4 283 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 ZAP70P43403 619 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 SCARF1Q14162 830 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 NFKBIBQ15653 356 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 KCNB2Q92953 911 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
MKS1-211ENST00000581761 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
MKS1-211ENST00000581761 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
MKS1-211ENST00000581761 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CARMIL3Q8ND23 1372 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 NPHP1O15259 732 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CHGBP05060 677 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CHRNDQ07001 517 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CCDC102BQ68D86 513 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
MKS1-211ENST00000581761 CIZ1Q9ULV3 898 aaPredicted RBP17.55■□□□□ 0.4
MKS1-211ENST00000581761 SLC27A2O14975 620 aa17.54■□□□□ 0.4
MKS1-211ENST00000581761 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
MKS1-211ENST00000581761 ARID4AP29374 1257 aaPredicted RBP17.54■□□□□ 0.4
MKS1-211ENST00000581761 MCAMP43121 646 aa17.54■□□□□ 0.4
MKS1-211ENST00000581761 PHKA1P46020 1223 aa17.54■□□□□ 0.4
MKS1-211ENST00000581761 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
MKS1-211ENST00000581761 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
MKS1-211ENST00000581761 COL4A1P02462 1669 aa17.53■□□□□ 0.4
MKS1-211ENST00000581761 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
MKS1-211ENST00000581761 DDIT3P35638 169 aa17.53■□□□□ 0.4
MKS1-211ENST00000581761 PI16Q6UXB8 463 aa17.53■□□□□ 0.4
MKS1-211ENST00000581761 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
MKS1-211ENST00000581761 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
MKS1-211ENST00000581761 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
MKS1-211ENST00000581761 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.4
MKS1-211ENST00000581761 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
MKS1-211ENST00000581761 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
MKS1-211ENST00000581761 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
MKS1-211ENST00000581761 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
MKS1-211ENST00000581761 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
MKS1-211ENST00000581761 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
MKS1-211ENST00000581761 MAST3O60307 1309 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 M0R2C6 588 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 SNAP23O00161 211 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
MKS1-211ENST00000581761 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
MKS1-211ENST00000581761 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 TMX3Q96JJ7 454 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■■■■■ 38.5
MKS1-211ENST00000581761 KIF13BQ9NQT8 1826 aa17.51■□□□□ 0.39
MKS1-211ENST00000581761 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 DPEP1P16444 411 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 KCNA3P22001 575 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 PSMA5P28066 241 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 TTC14Q96N46 770 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
MKS1-211ENST00000581761 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
MKS1-211ENST00000581761 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
MKS1-211ENST00000581761 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms