RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 PHAXQ9H814 394 aaKnown RBP13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 NBPF9Q3BBW0 867 aa13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 STRIP1Q5VSL9 837 aa13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 FBXO46Q6PJ61 603 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
CALCOCO2-228ENST00000576582 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 GNAI1P63096 354 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 DACT2Q5SW24 774 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 CCDC85AQ96PX6 553 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 IFT57Q9NWB7 429 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 MINPP1Q9UNW1 487 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
CALCOCO2-228ENST00000576582 PSME4Q14997 1843 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 WNT10BO00744 389 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 FKTNO75072 461 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 INHBEP58166 350 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
CALCOCO2-228ENST00000576582 ELL2O00472 640 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 CCT4P50991 539 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 CTSWP56202 376 aa13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 DDX10Q13206 875 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 SCAF8Q9UPN6 1271 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-228ENST00000576582 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-228ENST00000576582 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
CALCOCO2-228ENST00000576582 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
CALCOCO2-228ENST00000576582 APOBEC3FQ8IUX4 373 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-228ENST00000576582 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 INTS3Q68E01 1043 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 TTLL5Q6EMB2 1281 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
CALCOCO2-228ENST00000576582 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 GREM2Q9H772 168 aa13.74□□□□□ -0.21
CALCOCO2-228ENST00000576582 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 SASH1O94885 1247 aa13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 ZBED3Q96IU2 234 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 ANGEL1Q9UNK9 670 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-228ENST00000576582 ZNF804BA4D1E1 1349 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 H7C1W4 665 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 APAF1O14727 1248 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 PRKG1Q13976 671 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 MAP3K11Q16584 847 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 DEFB129Q9H1M3 183 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 R3HDMLQ9H3Y0 253 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
CALCOCO2-228ENST00000576582 MYH3P11055 1940 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 PPP1R12BO60237 982 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 GTF2IP78347 998 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 MTMR14Q8NCE2 650 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 STK31Q9BXU1 1019 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
CALCOCO2-228ENST00000576582 COL1A1P02452 1464 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 ZNF646O15015 1829 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 NEURL1BA8MQ27 555 aa13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 OTUD7BQ6GQQ9 843 aa13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
CALCOCO2-228ENST00000576582 MYO1BO43795 1136 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 CSF1RP07333 972 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 ITGA6P23229 1130 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 KCNJ4P48050 445 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
CALCOCO2-228ENST00000576582 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms