RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 RIC3Q7Z5B4 369 aa21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
CTDNEP1-211ENST00000575783 BRCA2P51587 3418 aa21.17■□□□□ 0.98
CTDNEP1-211ENST00000575783 ANKRD18AQ8IVF6 992 aa21.17■□□□□ 0.98
CTDNEP1-211ENST00000575783 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
CTDNEP1-211ENST00000575783 FZD1Q9UP38 647 aa21.17■□□□□ 0.98
CTDNEP1-211ENST00000575783 DACT2Q5SW24 774 aa21.16■□□□□ 0.98
CTDNEP1-211ENST00000575783 SLC10A4Q96EP9 437 aa21.16■□□□□ 0.98
CTDNEP1-211ENST00000575783 EN2P19622 333 aaPredicted RBP21.15■□□□□ 0.98
CTDNEP1-211ENST00000575783 LDLRAD1Q5T700 205 aa21.15■□□□□ 0.98
CTDNEP1-211ENST00000575783 IFNL1Q8IU54 200 aa21.15■□□□□ 0.98
CTDNEP1-211ENST00000575783 MANSC4A6NHS7 340 aaPredicted RBP21.14■□□□□ 0.97
CTDNEP1-211ENST00000575783 PDE8AO60658 829 aa21.14■□□□□ 0.97
CTDNEP1-211ENST00000575783 INHBEP58166 350 aa21.14■□□□□ 0.97
CTDNEP1-211ENST00000575783 MYD88Q99836 296 aa21.14■□□□□ 0.97
CTDNEP1-211ENST00000575783 PTPN22Q9Y2R2 807 aa21.14■□□□□ 0.97
CTDNEP1-211ENST00000575783 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
CTDNEP1-211ENST00000575783 HOXB7P09629 217 aa21.12■□□□□ 0.97
CTDNEP1-211ENST00000575783 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
CTDNEP1-211ENST00000575783 APOBEC3FQ8IUX4 373 aaKnown RBP21.12■□□□□ 0.97
CTDNEP1-211ENST00000575783 CD99L2Q8TCZ2 262 aa21.12■□□□□ 0.97
CTDNEP1-211ENST00000575783 MYO3BQ8WXR4 1341 aa21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 IGF2BP3O00425 579 aaKnown RBP eCLIP21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 PCCAP05165 728 aaPredicted RBP21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 ERO1AQ96HE7 468 aa21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
CTDNEP1-211ENST00000575783 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 CLMNQ96JQ2 1002 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 PHAXQ9H814 394 aaKnown RBP21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 EFCC1Q9HA90 598 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 MINPP1Q9UNW1 487 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 MED23Q9ULK4 1368 aa21.1■□□□□ 0.97
CTDNEP1-211ENST00000575783 TTLL5Q6EMB2 1281 aa21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 TMEM106CQ9BVX2 250 aa21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 COA1Q9GZY4 146 aa21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 DEFB129Q9H1M3 183 aa21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 CWC25Q9NXE8 425 aaPredicted RBP21.09■□□□□ 0.97
CTDNEP1-211ENST00000575783 ZBTB48P10074 688 aaPredicted RBP21.08■□□□□ 0.97
CTDNEP1-211ENST00000575783 CCT4P50991 539 aaKnown RBP21.08■□□□□ 0.97
CTDNEP1-211ENST00000575783 ARMC5Q96C12 935 aa21.08■□□□□ 0.97
CTDNEP1-211ENST00000575783 WNK4Q96J92 1243 aa21.08■□□□□ 0.97
CTDNEP1-211ENST00000575783 MMP14P50281 582 aa21.07■□□□□ 0.96
CTDNEP1-211ENST00000575783 CRHR2Q13324 411 aa21.07■□□□□ 0.96
CTDNEP1-211ENST00000575783 TXNRD3Q86VQ6 643 aa21.07■□□□□ 0.96
CTDNEP1-211ENST00000575783 BSDC1Q9NW68 430 aaPredicted RBP21.07■□□□□ 0.96
CTDNEP1-211ENST00000575783 TRIM35Q9UPQ4 493 aa21.07■□□□□ 0.96
CTDNEP1-211ENST00000575783 SZT2Q5T011 3432 aa21.06■□□□□ 0.96
CTDNEP1-211ENST00000575783 PPP1R12BO60237 982 aaPredicted RBP21.06■□□□□ 0.96
CTDNEP1-211ENST00000575783 OTUD7BQ6GQQ9 843 aa21.06■□□□□ 0.96
CTDNEP1-211ENST00000575783 CTSWP56202 376 aa21.05■□□□□ 0.96
CTDNEP1-211ENST00000575783 GTF2IP78347 998 aa21.05■□□□□ 0.96
CTDNEP1-211ENST00000575783 SP3Q02447 781 aa21.05■□□□□ 0.96
CTDNEP1-211ENST00000575783 ZBED3Q96IU2 234 aaPredicted RBP21.05■□□□□ 0.96
CTDNEP1-211ENST00000575783 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
CTDNEP1-211ENST00000575783 DLGAP5Q15398 846 aa21.04■□□□□ 0.96
CTDNEP1-211ENST00000575783 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
CTDNEP1-211ENST00000575783 GREM2Q9H772 168 aa21.04■□□□□ 0.96
CTDNEP1-211ENST00000575783 MYCP01106 439 aaPredicted RBP21.03■□□□□ 0.96
CTDNEP1-211ENST00000575783 CAP1Q01518 475 aa21.03■□□□□ 0.96
CTDNEP1-211ENST00000575783 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
CTDNEP1-211ENST00000575783 TTLL11Q8NHH1 800 aa21.03■□□□□ 0.96
CTDNEP1-211ENST00000575783 KLRK1P26718 216 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 SUPT20HL1Q3ZLR7 823 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 ZNF333Q96JL9 665 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 PTPN18Q99952 460 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 LEMD3Q9Y2U8 911 aa21.02■□□□□ 0.96
CTDNEP1-211ENST00000575783 PSME4Q14997 1843 aa21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 KIAA0100Q14667 2235 aaKnown RBP21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 H0YGN5 161 aa21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 GJA5P36382 358 aa21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 NBPF11Q86T75 865 aa21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 ZNF804BA4D1E1 1349 aa21.01■□□□□ 0.95
CTDNEP1-211ENST00000575783 CLRN2A0PK11 232 aa21■□□□□ 0.95
CTDNEP1-211ENST00000575783 IREB2P48200 963 aaKnown RBP21■□□□□ 0.95
CTDNEP1-211ENST00000575783 SLC9C1Q4G0N8 1177 aa21■□□□□ 0.95
CTDNEP1-211ENST00000575783 NBPF12Q5TAG4 269 aaPredicted RBP21■□□□□ 0.95
CTDNEP1-211ENST00000575783 PCDHAC2Q9Y5I4 1007 aa21■□□□□ 0.95
CTDNEP1-211ENST00000575783 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 IGHMBP2P38935 993 aaKnown RBP20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 VEZTQ9HBM0 779 aa20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 MAP3K2Q9Y2U5 619 aa20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 PPP2R3BQ9Y5P8 575 aa20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 PTCH2Q9Y6C5 1203 aa20.99■□□□□ 0.95
CTDNEP1-211ENST00000575783 UNCXA6NJT0 531 aa20.98■□□□□ 0.95
CTDNEP1-211ENST00000575783 F8W031 263 aaPredicted RBP20.98■□□□□ 0.95
CTDNEP1-211ENST00000575783 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
CTDNEP1-211ENST00000575783 KCNJ4P48050 445 aa20.98■□□□□ 0.95
CTDNEP1-211ENST00000575783 SSC5DA1L4H1 1573 aa20.97■□□□□ 0.95
CTDNEP1-211ENST00000575783 COL1A1P02452 1464 aaPredicted RBP20.97■□□□□ 0.95
CTDNEP1-211ENST00000575783 MYO1BO43795 1136 aa20.97■□□□□ 0.95
CTDNEP1-211ENST00000575783 ARHGEF6Q15052 776 aa20.97■□□□□ 0.95
CTDNEP1-211ENST00000575783 ANKRD13AQ8IZ07 590 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms