RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
NPLOC4-210ENST00000572824 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
NPLOC4-210ENST00000572824 CRY2Q49AN0 593 aa12.14□□□□□ -0.47
NPLOC4-210ENST00000572824 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
NPLOC4-210ENST00000572824 TPTE2Q6XPS3 522 aa12.14□□□□□ -0.47
NPLOC4-210ENST00000572824 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
NPLOC4-210ENST00000572824 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
NPLOC4-210ENST00000572824 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 MYBBP1AQ9BQG0 1328 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 AIMP1Q12904 312 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
NPLOC4-210ENST00000572824 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 NEFMP07197 916 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 RALBP1Q15311 655 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 COL13A1Q5TAT6 717 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 LAS1LQ9Y4W2 734 aaKnown RBP12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
NPLOC4-210ENST00000572824 SLC10A3P09131 477 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 JMYQ8N9B5 988 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 ABCC4O15439 1325 aa12.11□□□□□ -0.47
NPLOC4-210ENST00000572824 SPEF2Q9C093 1822 aa12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 HCLS1P14317 486 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 EAPPQ56P03 285 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
NPLOC4-210ENST00000572824 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
NPLOC4-210ENST00000572824 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-210ENST00000572824 HOXA10P31260 410 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-210ENST00000572824 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-210ENST00000572824 FZD9O00144 591 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 CHL1O00533 1208 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
NPLOC4-210ENST00000572824 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 AOC3Q16853 763 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 RUNDC1Q96C34 613 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
NPLOC4-210ENST00000572824 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 EPHX2P34913 555 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 EPS15P42566 896 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 SCNN1DP51172 638 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 RTKN2Q8IZC4 609 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 PSMD1Q99460 953 aa12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
NPLOC4-210ENST00000572824 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 RNF40O75150 1001 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 GCGRP47871 477 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 SPIRE2Q8WWL2 714 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 HACL1Q9UJ83 578 aa12.05□□□□□ -0.48
NPLOC4-210ENST00000572824 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 APAF1O14727 1248 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 PARP10Q53GL7 1025 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 WNT2BQ93097 391 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 CRAMP1Q96RY5 1269 aa12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 PHAXQ9H814 394 aaKnown RBP12.04□□□□□ -0.48
NPLOC4-210ENST00000572824 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms