RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 CTDNEP1O95476 244 aa23.57■■□□□ 1.36
MSLN-205ENST00000563941 TYRO3Q06418 890 aa23.57■■□□□ 1.36
MSLN-205ENST00000563941 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
MSLN-205ENST00000563941 ASAP1Q9ULH1 1129 aa23.57■■□□□ 1.36
MSLN-205ENST00000563941 MRVI1Q9Y6F6 885 aa23.57■■□□□ 1.36
MSLN-205ENST00000563941 PTPDC1A2A3K4 754 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 ZNF830Q96NB3 372 aaPredicted RBP23.56■■□□□ 1.36
MSLN-205ENST00000563941 PLA2G12BQ9BX93 195 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 TEX13AQ9BXU3 409 aaPredicted RBP23.56■■□□□ 1.36
MSLN-205ENST00000563941 HMGN5P82970 282 aaKnown RBP23.56■■□□□ 1.36
MSLN-205ENST00000563941 LRRFIP1Q32MZ4 808 aaKnown RBP23.56■■□□□ 1.36
MSLN-205ENST00000563941 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 NAA16Q6N069 864 aaPredicted RBP23.56■■□□□ 1.36
MSLN-205ENST00000563941 FAM200AQ8TCP9 573 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 BICD2Q8TD16 824 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 CLSTN2Q9H4D0 955 aa23.56■■□□□ 1.36
MSLN-205ENST00000563941 CCT2P78371 535 aaKnown RBP23.55■■□□□ 1.36
MSLN-205ENST00000563941 TTLL5Q6EMB2 1281 aa23.55■■□□□ 1.36
MSLN-205ENST00000563941 CKAP2LQ8IYA6 745 aa23.55■■□□□ 1.36
MSLN-205ENST00000563941 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
MSLN-205ENST00000563941 ZBTB38Q8NAP3 1195 aaPredicted RBP23.55■■□□□ 1.36
MSLN-205ENST00000563941 PIGBQ92521 554 aa23.55■■□□□ 1.36
MSLN-205ENST00000563941 CFAP45Q9UL16 551 aa23.55■■□□□ 1.36
MSLN-205ENST00000563941 CSF1RP07333 972 aa23.54■■□□□ 1.36
MSLN-205ENST00000563941 NWD2Q9ULI1 1742 aa23.54■■□□□ 1.36
MSLN-205ENST00000563941 NR1I2O75469 434 aa23.54■■□□□ 1.36
MSLN-205ENST00000563941 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
MSLN-205ENST00000563941 RBM43Q6ZSC3 357 aaKnown RBP23.54■■□□□ 1.36
MSLN-205ENST00000563941 TTC12Q9H892 705 aaPredicted RBP23.54■■□□□ 1.36
MSLN-205ENST00000563941 KIF3AQ9Y496 699 aa23.54■■□□□ 1.36
MSLN-205ENST00000563941 ZFYP08048 801 aaPredicted RBP23.53■■□□□ 1.36
MSLN-205ENST00000563941 FOSBP53539 338 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 WASHC4Q2M389 1173 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 CHST3Q7LGC8 479 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 NCOA5Q9HCD5 579 aaKnown RBP23.53■■□□□ 1.36
MSLN-205ENST00000563941 NAP1L2Q9ULW6 460 aaPredicted RBP23.53■■□□□ 1.36
MSLN-205ENST00000563941 ITGB4P16144 1822 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 SALL1Q9NSC2 1324 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 STARD3NLO95772 234 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 PDIA3P30101 505 aaKnown RBP23.53■■□□□ 1.36
MSLN-205ENST00000563941 SCARF1Q14162 830 aa23.53■■□□□ 1.36
MSLN-205ENST00000563941 ZNF274Q96GC6 653 aaPredicted RBP23.53■■□□□ 1.36
MSLN-205ENST00000563941 MAP3K15Q6ZN16 1313 aa23.52■■□□□ 1.36
MSLN-205ENST00000563941 CTNNA3Q9UI47 895 aa23.52■■□□□ 1.36
MSLN-205ENST00000563941 FOXP2O15409 715 aa23.51■■□□□ 1.35
MSLN-205ENST00000563941 ADD1P35611 737 aaKnown RBP23.51■■□□□ 1.35
MSLN-205ENST00000563941 GIGYF2Q6Y7W6 1299 aaKnown RBP23.51■■□□□ 1.35
MSLN-205ENST00000563941 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
MSLN-205ENST00000563941 RIC1Q4ADV7 1423 aa23.51■■□□□ 1.35
MSLN-205ENST00000563941 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.51■■□□□ 1.35
MSLN-205ENST00000563941 MYH7P12883 1935 aa23.51■■□□□ 1.35
MSLN-205ENST00000563941 ZAP70P43403 619 aa23.51■■□□□ 1.35
MSLN-205ENST00000563941 ANO6Q4KMQ2 910 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 ABCC12Q96J65 1359 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 CDHR2Q9BYE9 1310 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 CEBPZQ03701 1054 aaKnown RBP23.5■■□□□ 1.35
MSLN-205ENST00000563941 LUZP1Q86V48 1076 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 SYNE4Q8N205 404 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 FBXL16Q8N461 479 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 APPBP2Q92624 585 aa23.5■■□□□ 1.35
MSLN-205ENST00000563941 NHSL1Q5SYE7 1610 aa23.49■■□□□ 1.35
MSLN-205ENST00000563941 HLFQ16534 295 aa23.49■■□□□ 1.35
MSLN-205ENST00000563941 ATP2B3Q16720 1220 aa23.49■■□□□ 1.35
MSLN-205ENST00000563941 IMMTQ16891 758 aaKnown RBP23.49■■□□□ 1.35
MSLN-205ENST00000563941 GPTP24298 496 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 HAND2P61296 217 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 PI16Q6UXB8 463 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 CHMP4CQ96CF2 233 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 CBX8Q9HC52 389 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 RRP9O43818 475 aaKnown RBP23.48■■□□□ 1.35
MSLN-205ENST00000563941 HSP90AB3PQ58FF7 597 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 METTL24Q5JXM2 366 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 RCOR1Q9UKL0 485 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
MSLN-205ENST00000563941 CARMIL3Q8ND23 1372 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 PPFIA3O75145 1194 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 FGAP02671 866 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 EVCP57679 992 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 HSP90AA2PQ14568 343 aaPredicted RBP23.47■■□□□ 1.35
MSLN-205ENST00000563941 SASS6Q6UVJ0 657 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 FTOQ9C0B1 505 aaKnown RBP eCLIP23.47■■□□□ 1.35
MSLN-205ENST00000563941 PUS7LQ9H0K6 701 aaKnown RBP23.47■■□□□ 1.35
MSLN-205ENST00000563941 RIPOR2Q9Y4F9 1068 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 LRP6O75581 1613 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 MYH3P11055 1940 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 ITGA6P23229 1130 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 NOLC1Q14978 699 aaKnown RBP eCLIP23.47■■□□□ 1.35
MSLN-205ENST00000563941 TTLL11Q8NHH1 800 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 GREM2Q9H772 168 aa23.47■■□□□ 1.35
MSLN-205ENST00000563941 GPHNQ9NQX3 736 aaPredicted RBP23.47■■□□□ 1.35
MSLN-205ENST00000563941 UQCRHLA0A096LP55 91 aa23.46■■□□□ 1.35
MSLN-205ENST00000563941 UQCRHP07919 91 aa23.46■■□□□ 1.35
MSLN-205ENST00000563941 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
MSLN-205ENST00000563941 ZNF396Q96N95 335 aaPredicted RBP23.46■■□□□ 1.35
MSLN-205ENST00000563941 AKAP11Q9UKA4 1901 aa23.46■■□□□ 1.35
MSLN-205ENST00000563941 GUCY1B3Q02153 619 aa23.45■■□□□ 1.35
MSLN-205ENST00000563941 ATL3Q6DD88 541 aa23.45■■□□□ 1.35
MSLN-205ENST00000563941 SPC24Q8NBT2 197 aa23.45■■□□□ 1.35
MSLN-205ENST00000563941 USP28Q96RU2 1077 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms