RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CDC42BPGQ6DT37 1551 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ADAMTS2O95450 1211 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 MBD3O95983 291 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ERCC3P19447 782 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 VARSP26640 1264 aaKnown RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 FGD1P98174 961 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 RABEP1Q15276 862 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 CCDC102BQ68D86 513 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 LRSAM1Q6UWE0 723 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 FTSJ3Q8IY81 847 aaKnown RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 GCC1Q96CN9 775 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 MRRFQ96E11 262 aaKnown RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 FAM13BQ9NYF5 915 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ABCA9Q8IUA7 1624 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ARHGAP5Q13017 1502 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ARAP3Q8WWN8 1544 aa7.26□□□□□ -1.25
SNRPA1-209ENST00000560307 ATAD2Q6PL18 1390 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 PIK3R4Q99570 1358 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 H3BRB1 525 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 ARID5BQ14865 1188 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 UVSSAQ2YD98 709 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 SH3BP5LQ7L8J4 393 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 VWA5B2Q8N398 1253 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 BAP1Q92560 729 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 SLC10A4Q96EP9 437 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 CFAP53Q96M91 514 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 KIF2CQ99661 725 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 MKNK1Q9BUB5 465 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 TUT1Q9H6E5 874 aaKnown RBP7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 ABCC1P33527 1531 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 PPIP5K1Q6PFW1 1433 aa7.25□□□□□ -1.25
SNRPA1-209ENST00000560307 KIF24Q5T7B8 1368 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 IPO8O15397 1037 aaKnown RBP7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 RAB15P59190 212 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 KIAA2012Q0VF49 1180 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 RGL3Q3MIN7 710 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 ALDH1L2Q3SY69 923 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 RNF20Q5VTR2 975 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 ATF7IPQ6VMQ6 1270 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 SV2AQ7L0J3 742 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 TCP11L2Q8N4U5 519 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 FAM184AQ8NB25 1140 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 GIPC2Q8TF65 315 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 LMBRD1Q9NUN5 540 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 PTCH1Q13635 1447 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 ASXL2Q76L83 1435 aa7.24□□□□□ -1.25
SNRPA1-209ENST00000560307 ANKRD33BA6NCL7 494 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 ZBTB7BO15156 539 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 CDC45O75419 566 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 HNRNPMP52272 730 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 SYCP1Q15431 976 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 BPHLQ86WA6 291 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 CHD1LQ86WJ1 897 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 SIX5Q8N196 739 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 MPNDQ8N594 471 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 SYAP1Q96A49 352 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 RBSNQ9H1K0 784 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 ZBTB40Q9NUA8 1239 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 PCDHB11Q9Y5F2 797 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 NSD3Q9BZ95 1437 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 FRMPD1Q5SYB0 1578 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 FANCAO15360 1455 aa7.23□□□□□ -1.25
SNRPA1-209ENST00000560307 FIGNL2A6NMB9 653 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 TPM3P06753 285 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 CELA2BP08218 269 aaPredicted RBP7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 FAM193AP78312 1265 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 ERFEQ4G0M1 354 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 GAS2L2Q8NHY3 880 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 PIBF1Q8WXW3 757 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 FOXJ1Q92949 421 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 SIRT1Q96EB6 747 aa7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 COL3A1P02461 1466 aaPredicted RBP7.22□□□□□ -1.25
SNRPA1-209ENST00000560307 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 TTLL8A6PVC2 850 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 TRIM27P14373 513 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 ZNF16P17020 682 aaPredicted RBP7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 MAPK1P28482 360 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 XPCQ01831 940 aaPredicted RBP7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 USP4Q13107 963 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 CAVIN1Q6NZI2 390 aaKnown RBP7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 CREBRFQ8IUR6 639 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 MEIOBQ8N635 442 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 C1orf216Q8TAB5 229 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 SMC4Q9NTJ3 1288 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 SPTLC3Q9NUV7 552 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms