RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ESCO1Q5FWF5 840 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 ZNF428Q96B54 188 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 SOGA1O94964 1423 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 COG7P83436 770 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 PPP1R21Q6ZMI0 780 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 AFG3L2Q9Y4W6 797 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 PPFIA1Q13136 1202 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 CABP5Q9NP86 173 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 THEGQ9P2T0 379 aa15.6■□□□□ 0.09
CSPG4P12-202ENST00000559989 HLA-DOAP06340 250 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 TRMT1LQ7Z2T5 733 aaKnown RBP15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 KIFAP3Q92845 792 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 ZSCAN23Q3MJ62 389 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 ARID5AQ03989 594 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 ANO6Q4KMQ2 910 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 KCNG4Q8TDN1 519 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 TNPO1Q92973 898 aaKnown RBP15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 BOLA2Q9H3K6 86 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 MUM1Q2TAK8 710 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
CSPG4P12-202ENST00000559989 SPECC1L-ADORA2AF8WAN1 911 aa15.58■□□□□ 0.09
CSPG4P12-202ENST00000559989 VAT1LQ9HCJ6 419 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 OPHN1O60890 802 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 GABPAQ06546 454 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 RNF8O76064 485 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 DIXDC1Q155Q3 683 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 BAG3O95817 575 aa15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 ZC3H6P61129 1189 aaKnown RBP15.58■□□□□ 0.08
CSPG4P12-202ENST00000559989 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 SULT6B1Q6IMI4 303 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 MCM10Q7L590 875 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 BAG1Q99933 345 aaPredicted RBP15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 SLC26A6Q9BXS9 759 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 AKNAQ7Z591 1439 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 RHOXF2BP0C7M4 288 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 PPP2R1AP30153 589 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 HPDP32754 393 aaPredicted RBP15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 MFSD6Q6ZSS7 791 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 MORC4Q8TE76 937 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 RHOXF2Q9BQY4 288 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 CDR2Q01850 454 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 CDCA7LQ96GN5 454 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 FAF1Q9UNN5 650 aaPredicted RBP15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 ANKRD30BQ9BXX2 1392 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 SSFA2P28290 1259 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 AFMP43652 599 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 ZNF569Q5MCW4 686 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 CCDC122Q5T0U0 273 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 VTI1AQ96AJ9 217 aa15.57■□□□□ 0.08
CSPG4P12-202ENST00000559989 TSPY2A6NKD2 308 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 UBXN1Q04323 297 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 LRCH2Q5VUJ6 765 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 LRRC43Q8N309 656 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 LGSNQ5TDP6 509 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 EVI5LQ96CN4 794 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 SYF2O95926 243 aaKnown RBP15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 NDUFAB1O14561 156 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 MCM7P33993 719 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 HMG20BQ9P0W2 317 aa15.56■□□□□ 0.08
CSPG4P12-202ENST00000559989 B4DLN1 442 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 MRPL12P52815 198 aaKnown RBP15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 TFIP11Q9UBB9 837 aaKnown RBP15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 GUCA1BQ9UMX6 200 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 BIRC2Q13490 618 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 NACADO15069 1562 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 VSIG1Q86XK7 387 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 SLC8A3P57103 927 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 KMT5BQ4FZB7 885 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 ATP2A3Q93084 1043 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 LUC7L3O95232 432 aaKnown RBP15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 SDCCAG3Q96C92 435 aa15.55■□□□□ 0.08
CSPG4P12-202ENST00000559989 AP1ARQ63HQ0 302 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 NCOA7Q8NI08 942 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 HHATQ5VTY9 493 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 GCKP35557 465 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 CHMP2AO43633 222 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 MAP2K2P36507 400 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 PHEXP78562 749 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 UBL4BQ8N7F7 174 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 TRIM4Q9C037 500 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 GOLGA6CA6NDK9 693 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 PFDN1O60925 122 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 GOLGA6DP0CG33 693 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 IFT20Q8IY31 132 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 SMAP1Q8IYB5 467 aaPredicted RBP15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms