RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNF609O15014 1411 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 KIF3CO14782 793 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 METTL24Q5JXM2 366 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
SNX1-204ENST00000559061 EYA3Q99504 573 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
SNX1-204ENST00000559061 PCDHB15Q9Y5E8 787 aa14.25□□□□□ -0.13
SNX1-204ENST00000559061 MYH13Q9UKX3 1938 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 SHTN1A0MZ66 631 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 RAD17O75943 681 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 SCNN1DP51172 638 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 UBE4AQ14139 1066 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 JDP2Q8WYK2 163 aa14.24□□□□□ -0.13
SNX1-204ENST00000559061 PSMD14O00487 310 aa14.23□□□□□ -0.13
SNX1-204ENST00000559061 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
SNX1-204ENST00000559061 GYG1P46976 350 aa14.23□□□□□ -0.13
SNX1-204ENST00000559061 TFCP2Q12800 502 aa14.23□□□□□ -0.13
SNX1-204ENST00000559061 FAM84BQ96KN1 310 aaPredicted RBP14.23□□□□□ -0.13
SNX1-204ENST00000559061 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
SNX1-204ENST00000559061 ZC3H12CQ9C0D7 883 aaKnown RBP14.23□□□□□ -0.13
SNX1-204ENST00000559061 IL1R1P14778 569 aa14.22□□□□□ -0.13
SNX1-204ENST00000559061 ADORA1P30542 326 aa14.22□□□□□ -0.13
SNX1-204ENST00000559061 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
SNX1-204ENST00000559061 FBXO33Q7Z6M2 555 aa14.22□□□□□ -0.13
SNX1-204ENST00000559061 GPC2Q8N158 579 aa14.22□□□□□ -0.13
SNX1-204ENST00000559061 CD209Q9NNX6 404 aa14.22□□□□□ -0.13
SNX1-204ENST00000559061 KCNJ4P48050 445 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 DACT2Q5SW24 774 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 RPAP2Q8IXW5 612 aaPredicted RBP14.21□□□□□ -0.13
SNX1-204ENST00000559061 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 GMLQ99445 158 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 COA1Q9GZY4 146 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 EXOC6BQ9Y2D4 811 aa14.21□□□□□ -0.13
SNX1-204ENST00000559061 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
SNX1-204ENST00000559061 AKAP11Q9UKA4 1901 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 SURF6O75683 361 aaKnown RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 VIL1P09327 827 aaKnown RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 BCAMP50895 628 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 ATP2B3Q16720 1220 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 CIAPIN1Q6FI81 312 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 TDRD7Q8NHU6 1098 aaKnown RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 GPBP1L1Q9HC44 474 aaPredicted RBP14.2□□□□□ -0.14
SNX1-204ENST00000559061 GJA3Q9Y6H8 435 aa14.2□□□□□ -0.14
SNX1-204ENST00000559061 KDM2BQ8NHM5 1336 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 EGFRP00533 1210 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 EPS15P42566 896 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 TIMM10P62072 90 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
SNX1-204ENST00000559061 PODNQ7Z5L7 613 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 LPIN2Q92539 896 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
SNX1-204ENST00000559061 A0A1B0GUL7 405 aa14.18□□□□□ -0.14
SNX1-204ENST00000559061 PHKA1P46020 1223 aa14.18□□□□□ -0.14
SNX1-204ENST00000559061 GRIK5Q16478 980 aa14.18□□□□□ -0.14
SNX1-204ENST00000559061 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
SNX1-204ENST00000559061 TLR7Q9NYK1 1049 aaKnown RBP14.18□□□□□ -0.14
SNX1-204ENST00000559061 GPRC5DQ9NZD1 345 aa14.18□□□□□ -0.14
SNX1-204ENST00000559061 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
SNX1-204ENST00000559061 USP17L3A6NCW0 530 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 USP17L4A6NCW7 530 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 HIBADHP31937 336 aaKnown RBP14.17□□□□□ -0.14
SNX1-204ENST00000559061 G3BP1Q13283 466 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX1-204ENST00000559061 TNNI3KQ59H18 835 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 RSBN1LQ6PCB5 846 aaPredicted RBP14.17□□□□□ -0.14
SNX1-204ENST00000559061 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 IQSEC3Q9UPP2 1182 aaPredicted RBP14.17□□□□□ -0.14
SNX1-204ENST00000559061 FPGT-TNNI3KV9GXZ4 949 aa14.17□□□□□ -0.14
SNX1-204ENST00000559061 FAM205AQ6ZU69 1335 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 MYO5AQ9Y4I1 1855 aaKnown RBP14.16□□□□□ -0.14
SNX1-204ENST00000559061 SLC5A1P13866 664 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 HIRAP54198 1017 aaPredicted RBP14.16□□□□□ -0.14
SNX1-204ENST00000559061 GTF2IP78347 998 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 STRIP1Q5VSL9 837 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 ZNF804AQ7Z570 1209 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 TRPM4Q8TD43 1214 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
SNX1-204ENST00000559061 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
SNX1-204ENST00000559061 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
SNX1-204ENST00000559061 ZBTB22O15209 634 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 IFIT1P09914 478 aaKnown RBP14.15□□□□□ -0.14
SNX1-204ENST00000559061 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
SNX1-204ENST00000559061 SCARF1Q14162 830 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 TNIP1Q15025 636 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 MICALL2Q8IY33 904 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 RHPN1Q8TCX5 695 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 DBNDD2Q9BQY9 259 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 GPR108Q9NPR9 543 aa14.15□□□□□ -0.14
SNX1-204ENST00000559061 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
SNX1-204ENST00000559061 AOX1Q06278 1338 aa14.15□□□□□ -0.15
SNX1-204ENST00000559061 ECM29Q5VYK3 1845 aa14.14□□□□□ -0.15
SNX1-204ENST00000559061 EPHX2P34913 555 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms