RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
SCG3-203ENST00000558709 CCDC85AQ96PX6 553 aaPredicted RBP10.99□□□□□ -0.65
SCG3-203ENST00000558709 CYLDQ9NQC7 956 aa10.99□□□□□ -0.65
SCG3-203ENST00000558709 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
SCG3-203ENST00000558709 UPP2O95045 317 aa10.98□□□□□ -0.65
SCG3-203ENST00000558709 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
SCG3-203ENST00000558709 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
SCG3-203ENST00000558709 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
SCG3-203ENST00000558709 SOX11P35716 441 aa10.97□□□□□ -0.65
SCG3-203ENST00000558709 SCTRP47872 440 aa10.97□□□□□ -0.65
SCG3-203ENST00000558709 IP6K1Q92551 441 aa10.97□□□□□ -0.65
SCG3-203ENST00000558709 ROCK2O75116 1388 aaKnown RBP10.96□□□□□ -0.65
SCG3-203ENST00000558709 PALLDQ8WX93 1383 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 TRAK2O60296 914 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 TOMM70O94826 608 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 AMIGO3Q86WK7 504 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.65
SCG3-203ENST00000558709 DNMT3LQ9UJW3 386 aa10.96□□□□□ -0.65
SCG3-203ENST00000558709 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
SCG3-203ENST00000558709 PXDNLA1KZ92 1463 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 SOBPA7XYQ1 873 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 PTGIRP43119 386 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
SCG3-203ENST00000558709 FLAD1Q8NFF5 587 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 ALG2Q9H553 416 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 PCDHB11Q9Y5F2 797 aa10.95□□□□□ -0.66
SCG3-203ENST00000558709 RAD21O60216 631 aa10.94□□□□□ -0.66
SCG3-203ENST00000558709 HTRA3P83110 453 aa10.94□□□□□ -0.66
SCG3-203ENST00000558709 RELBQ01201 579 aa10.94□□□□□ -0.66
SCG3-203ENST00000558709 SMIM5Q71RC9 77 aa10.94□□□□□ -0.66
SCG3-203ENST00000558709 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
SCG3-203ENST00000558709 NSD3Q9BZ95 1437 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 HOXC9P31274 260 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 LCE2CQ5TA81 110 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
SCG3-203ENST00000558709 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
SCG3-203ENST00000558709 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 TTLL8A6PVC2 850 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 TNS4Q8IZW8 715 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 USHBP1Q8N6Y0 703 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SCG3-203ENST00000558709 POM121CA8CG34 1229 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 TERTO14746 1132 aaKnown RBP10.91□□□□□ -0.66
SCG3-203ENST00000558709 FBLN1P23142 703 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 CTSOP43234 321 aaPredicted RBP10.91□□□□□ -0.66
SCG3-203ENST00000558709 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
SCG3-203ENST00000558709 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 INSM2Q96T92 566 aaPredicted RBP10.91□□□□□ -0.66
SCG3-203ENST00000558709 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
SCG3-203ENST00000558709 ZNF831Q5JPB2 1677 aa10.91□□□□□ -0.66
SCG3-203ENST00000558709 RTL1A6NKG5 1358 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 PCDH11XQ9BZA7 1347 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 PCDH11YQ9BZA8 1340 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 KCPQ6ZWJ8 1503 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 ANKRD26Q9UPS8 1709 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 MAN1A2O60476 641 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 PRELPP51888 382 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 MPRIPQ6WCQ1 1025 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 NXF1Q9UBU9 619 aaKnown RBP10.9□□□□□ -0.66
SCG3-203ENST00000558709 VIRMAQ69YN4 1812 aaKnown RBP10.9□□□□□ -0.66
SCG3-203ENST00000558709 C10orf71Q711Q0 1435 aa10.9□□□□□ -0.66
SCG3-203ENST00000558709 DLEC1Q9Y238 1755 aa10.9□□□□□ -0.67
SCG3-203ENST00000558709 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 AFDNP55196 1824 aaKnown RBP10.89□□□□□ -0.67
SCG3-203ENST00000558709 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 SSFA2P28290 1259 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 AMPHP49418 695 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 SEMA3FQ13275 785 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 NBPF6Q5VWK0 638 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 RNF217Q8TC41 542 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 NBPF4Q96M43 638 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
SCG3-203ENST00000558709 SMG6Q86US8 1419 aaKnown RBP10.89□□□□□ -0.67
SCG3-203ENST00000558709 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
SCG3-203ENST00000558709 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
SCG3-203ENST00000558709 CYP2U1Q7Z449 544 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 DOLKQ9UPQ8 538 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 PLEKHG2Q9H7P9 1386 aa10.88□□□□□ -0.67
SCG3-203ENST00000558709 A6NJR5 290 aa10.87□□□□□ -0.67
SCG3-203ENST00000558709 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
SCG3-203ENST00000558709 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
SCG3-203ENST00000558709 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
SCG3-203ENST00000558709 C16orf71Q8IYS4 520 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms