RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 EPS8L3Q8TE67 593 aaKnown RBP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 CEP44Q9C0F1 390 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 DNAJB12Q9NXW2 375 aaKnown RBP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 ROBO2Q9HCK4 1378 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 CYP2E1P05181 493 aaPredicted RBP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 BMP4P12644 408 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 HOXB4P17483 251 aaPredicted RBP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 MX2P20592 715 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 MAPK8P45983 427 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF787Q6DD87 383 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 TREML4Q6UXN2 200 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 FCHSD1Q86WN1 690 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 RASGRP4Q8TDF6 673 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 PNMA5Q96PV4 448 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 ZKSCAN3Q9BRR0 538 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 BACH2Q9BYV9 841 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF576Q9H609 170 aa2.88□□□□□ -1.95
HIF1A-212ENST00000557538 DDX41Q9UJV9 622 aaKnown RBP2.88□□□□□ -1.95
HIF1A-212ENST00000557538 IGF1RP08069 1367 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 DCDC2BA2VCK2 349 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 PDE2AO00408 941 aaPredicted RBP2.87□□□□□ -1.95
HIF1A-212ENST00000557538 OIP5O43482 229 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 PWP1Q13610 501 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 COL9A3Q14050 684 aaPredicted RBP2.87□□□□□ -1.95
HIF1A-212ENST00000557538 LCE2CQ5TA81 110 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 ACDQ96AP0 544 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 SPATA32Q96LK8 384 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 SETDB2Q96T68 719 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 LRRC3Q9BY71 257 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 OSGEPQ9NPF4 335 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 USP20Q9Y2K6 914 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 A6NHS1 94 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 B3GALT4O96024 378 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 BAG6P46379 1132 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 ALYREFQ86V81 257 aaKnown RBP2.87□□□□□ -1.95
HIF1A-212ENST00000557538 BSNDQ8WZ55 320 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF428Q96B54 188 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 LPIN3Q9BQK8 851 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 OXCT2Q9BYC2 517 aaPredicted RBP2.87□□□□□ -1.95
HIF1A-212ENST00000557538 BCRP11274 1271 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 RNF34Q969K3 372 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 OSMRQ99650 979 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 NPHS2Q9NP85 383 aa2.87□□□□□ -1.95
HIF1A-212ENST00000557538 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 ARHGEF15O94989 841 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 ADH7P40394 386 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 COL9A2Q14055 689 aaPredicted RBP2.86□□□□□ -1.95
HIF1A-212ENST00000557538 GRIN2CQ14957 1233 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF654Q8IZM8 581 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 BHMTQ93088 406 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 COL25A1Q9BXS0 654 aaPredicted RBP2.86□□□□□ -1.95
HIF1A-212ENST00000557538 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 RBSNQ9H1K0 784 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 EHD4Q9H223 541 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 MRS2Q9HD23 443 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 ERBB4Q15303 1308 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 SMNDC1O75940 238 aaKnown RBP eCLIP2.86□□□□□ -1.953e-7■■□□□ 14.1
HIF1A-212ENST00000557538 IRS1P35568 1242 aa2.86□□□□□ -1.95
HIF1A-212ENST00000557538 ZC3H6P61129 1189 aaKnown RBP2.86□□□□□ -1.95
HIF1A-212ENST00000557538 NECAB3Q96P71 396 aaPredicted RBP2.86□□□□□ -1.95
HIF1A-212ENST00000557538 A0A096LPE4 126 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 A0A1W2PPZ6 126 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 GREM1O60565 184 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 USP17L7P0C7H9 530 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 PTPRAP18433 802 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 GARTP22102 1010 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 ALAS2P22557 587 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 ZNF76P36508 570 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 GJA8P48165 433 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 RNFT1Q5M7Z0 435 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 PERM1Q5SV97 790 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 VN1R5Q7Z5H4 357 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 MICALL1Q8N3F8 863 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 BTBD6Q96KE9 485 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 RHOVQ96L33 236 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 NRSN2Q9GZP1 204 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.85□□□□□ -1.95
HIF1A-212ENST00000557538 LMNB2Q03252 620 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 AGMOQ6ZNB7 445 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 POP1Q99575 1024 aaKnown RBP2.85□□□□□ -1.95
HIF1A-212ENST00000557538 TINF2Q9BSI4 451 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 KRT82Q9NSB4 513 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 RNF19AQ9NV58 838 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 VTI1BQ9UEU0 232 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 GGA1Q9UJY5 639 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 PRR12Q9ULL5 1215 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 CYP8B1Q9UNU6 501 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 MEGF11A6BM72 1044 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
HIF1A-212ENST00000557538 AP3B2Q13367 1082 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 LINC00114Q6XXX2 140 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 EMILIN2Q9BXX0 1053 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 RASSF4Q9H2L5 321 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 LATS2Q9NRM7 1088 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 NAGPAQ9UK23 515 aa2.85□□□□□ -1.95
HIF1A-212ENST00000557538 GHRHP01286 108 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 NID1P14543 1247 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 BMP6P22004 513 aa2.84□□□□□ -1.95
HIF1A-212ENST00000557538 NME2P22392 152 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms