RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PTPRAP18433 802 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 CDC25BP30305 580 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 CD97P48960 835 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 KIAA1211Q6ZU35 1233 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 FOXD4L4Q8WXT5 416 aaPredicted RBP5.61□□□□□ -1.51
FOXN3-216ENST00000557496 CEP41Q9BYV8 373 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 SH2B1Q9NRF2 756 aaPredicted RBP5.61□□□□□ -1.51
FOXN3-216ENST00000557496 SALL4Q9UJQ4 1053 aa5.61□□□□□ -1.51
FOXN3-216ENST00000557496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.61□□□□□ -1.51
FOXN3-216ENST00000557496 H3BRJ5 948 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 NFKBIEO00221 500 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 GSC2O15499 205 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 DHX15O43143 795 aaKnown RBP5.6□□□□□ -1.51
FOXN3-216ENST00000557496 IGLV1-40P01703 118 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 PDGFAP04085 211 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 RPLP1P05386 114 aaKnown RBP5.6□□□□□ -1.51
FOXN3-216ENST00000557496 ACPPP15309 386 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 C1orf127Q8N9H9 656 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 UBASH3BQ8TF42 649 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 EDEM1Q92611 657 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 FAM46AQ96IP4 442 aaKnown RBP5.6□□□□□ -1.51
FOXN3-216ENST00000557496 SEC31BQ9NQW1 1179 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 STOML1Q9UBI4 398 aa5.6□□□□□ -1.51
FOXN3-216ENST00000557496 DDX3YO15523 660 aaKnown RBP5.59□□□□□ -1.51
FOXN3-216ENST00000557496 PIP4K2BP78356 416 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.51
FOXN3-216ENST00000557496 DUOXA2Q1HG44 320 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 WNT8BQ93098 351 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 KLHDC7BQ96G42 594 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 MYRFLQ96LU7 910 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 CHRDQ9H2X0 955 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 GGNBP2Q9H3C7 697 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 PCMTD2Q9NV79 361 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 DZANK1Q9NVP4 752 aa5.59□□□□□ -1.51
FOXN3-216ENST00000557496 A6NHS1 94 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 ARID3CA6NKF2 412 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 TMEM88BA6NKF7 163 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 KIAA1324LA8MWY0 1029 aaPredicted RBP5.58□□□□□ -1.52
FOXN3-216ENST00000557496 PCSK2P16519 638 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 CES1P23141 567 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 MPSTP25325 297 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 MZF1P28698 734 aaPredicted RBP5.58□□□□□ -1.52
FOXN3-216ENST00000557496 SSTR4P31391 388 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 EIF1AXP47813 144 aaKnown RBP5.58□□□□□ -1.52
FOXN3-216ENST00000557496 NOM1Q5C9Z4 860 aaKnown RBP5.58□□□□□ -1.52
FOXN3-216ENST00000557496 UTP4Q969X6 686 aaKnown RBP5.58□□□□□ -1.52
FOXN3-216ENST00000557496 C7orf69Q9H7B7 122 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 OSGEPQ9NPF4 335 aa5.58□□□□□ -1.52
FOXN3-216ENST00000557496 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
FOXN3-216ENST00000557496 TGFB1P01137 390 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 CABP4P57796 275 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 NFIAQ12857 509 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.57□□□□□ -1.52
FOXN3-216ENST00000557496 ZDHHC13Q8IUH4 622 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 GTF3C2Q8WUA4 911 aaPredicted RBP5.57□□□□□ -1.52
FOXN3-216ENST00000557496 HHIPQ96QV1 700 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
FOXN3-216ENST00000557496 TRPA1O75762 1119 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 SSFA2P28290 1259 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 C8orf34Q49A92 452 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 ANKRD34AQ69YU3 496 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 TRIM42Q8IWZ5 723 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 TMEM102Q8N9M5 508 aaPredicted RBP5.56□□□□□ -1.52
FOXN3-216ENST00000557496 PMEPA1Q969W9 287 aa5.56□□□□□ -1.52
FOXN3-216ENST00000557496 HMX2A2RU54 273 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 COBLO75128 1261 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 MED26O95402 600 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 NPR3P17342 541 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 PREPP48147 710 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 NLRP12P59046 1061 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 MTMR3Q13615 1198 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 RNF43Q68DV7 783 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 MCTP1Q6DN14 999 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 FAM20CQ8IXL6 584 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 DBNDD2Q9BQY9 259 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 RNF208Q9H0X6 261 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 POLIQ9UNA4 740 aa5.55□□□□□ -1.52
FOXN3-216ENST00000557496 EREGO14944 169 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 TNFRSF21O75509 655 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 ALKBH2Q6NS38 261 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 VN1R5Q7Z5H4 357 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 CCDC82Q8N4S0 544 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 TTC16Q8NEE8 873 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 SLC7A3Q8WY07 619 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 NXPE3Q969Y0 559 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 OSMRQ99650 979 aa5.54□□□□□ -1.52
FOXN3-216ENST00000557496 MEGF11A6BM72 1044 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 PRR19A6NJB7 356 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 BMP3P12645 472 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 SPINK2P20155 84 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 C19orf57Q0VDD7 668 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 KRTAP1-3Q8IUG1 177 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 CLEC10AQ8IUN9 316 aa5.53□□□□□ -1.52
FOXN3-216ENST00000557496 BSNDQ8WZ55 320 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms