RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ETFBKMTQ8IXQ9 262 aa10.42□□□□□ -0.74
VRK1-203ENST00000555067 SAP130Q9H0E3 1048 aa10.42□□□□□ -0.74
VRK1-203ENST00000555067 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
VRK1-203ENST00000555067 ATP11AP98196 1134 aa10.41□□□□□ -0.74
VRK1-203ENST00000555067 TXNDC11Q6PKC3 985 aa10.41□□□□□ -0.74
VRK1-203ENST00000555067 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
VRK1-203ENST00000555067 ADGRE2Q9UHX3 823 aa10.41□□□□□ -0.74
VRK1-203ENST00000555067 WNT11O96014 354 aa10.4□□□□□ -0.74
VRK1-203ENST00000555067 CDC27P30260 824 aa10.4□□□□□ -0.74
VRK1-203ENST00000555067 CLEC10AQ8IUN9 316 aa10.4□□□□□ -0.74
VRK1-203ENST00000555067 KLHL23Q8NBE8 558 aa10.4□□□□□ -0.74
VRK1-203ENST00000555067 FSCN2O14926 492 aa10.39□□□□□ -0.75
VRK1-203ENST00000555067 FAM20CQ8IXL6 584 aa10.39□□□□□ -0.75
VRK1-203ENST00000555067 FAM83CQ9BQN1 747 aa10.39□□□□□ -0.75
VRK1-203ENST00000555067 LACRTQ9GZZ8 138 aa10.39□□□□□ -0.75
VRK1-203ENST00000555067 TNFRSF10BO14763 440 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 ADAM11O75078 769 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 KIF4AO95239 1232 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 HYAL2Q12891 473 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 CEP135Q66GS9 1140 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 FOXD4L4Q8WXT5 416 aaPredicted RBP10.38□□□□□ -0.75
VRK1-203ENST00000555067 GTF3C3Q9Y5Q9 886 aa10.38□□□□□ -0.75
VRK1-203ENST00000555067 SMNDC1O75940 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
VRK1-203ENST00000555067 DUOXA2Q1HG44 320 aa10.37□□□□□ -0.75
VRK1-203ENST00000555067 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.37□□□□□ -0.75
VRK1-203ENST00000555067 SHKBP1Q8TBC3 707 aa10.37□□□□□ -0.75
VRK1-203ENST00000555067 PIK3R5Q8WYR1 880 aa10.37□□□□□ -0.75
VRK1-203ENST00000555067 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
VRK1-203ENST00000555067 NAA30Q147X3 362 aaPredicted RBP10.36□□□□□ -0.75
VRK1-203ENST00000555067 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
VRK1-203ENST00000555067 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
VRK1-203ENST00000555067 RASSF4Q9H2L5 321 aa10.36□□□□□ -0.75
VRK1-203ENST00000555067 EPHA1P21709 976 aa10.35□□□□□ -0.75
VRK1-203ENST00000555067 ATP2B4P23634 1241 aa10.35□□□□□ -0.75
VRK1-203ENST00000555067 UBASH3BQ8TF42 649 aa10.35□□□□□ -0.75
VRK1-203ENST00000555067 SPACA7Q96KW9 195 aa10.35□□□□□ -0.75
VRK1-203ENST00000555067 STIM2Q9P246 746 aa10.35□□□□□ -0.75
VRK1-203ENST00000555067 UBAP1LF5GYI3 381 aa10.34□□□□□ -0.75
VRK1-203ENST00000555067 DDX3YO15523 660 aaKnown RBP10.34□□□□□ -0.75
VRK1-203ENST00000555067 ZAP70P43403 619 aa10.34□□□□□ -0.75
VRK1-203ENST00000555067 KLHDC7BQ96G42 594 aa10.34□□□□□ -0.75
VRK1-203ENST00000555067 ADAM19Q9H013 955 aa10.34□□□□□ -0.75
VRK1-203ENST00000555067 FNDC3AQ9Y2H6 1198 aaKnown RBP10.34□□□□□ -0.75
VRK1-203ENST00000555067 ARID3CA6NKF2 412 aa10.33□□□□□ -0.76
VRK1-203ENST00000555067 PREPP48147 710 aa10.33□□□□□ -0.76
VRK1-203ENST00000555067 FAM117BQ6P1L5 589 aa10.33□□□□□ -0.76
VRK1-203ENST00000555067 BEND4Q6ZU67 534 aa10.33□□□□□ -0.76
VRK1-203ENST00000555067 PBX4Q9BYU1 374 aa10.33□□□□□ -0.76
VRK1-203ENST00000555067 BMP3P12645 472 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 CDC25BP30305 580 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 ANKRD34AQ69YU3 496 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 SEC31BQ9NQW1 1179 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 HIF3AQ9Y2N7 669 aa10.32□□□□□ -0.76
VRK1-203ENST00000555067 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
VRK1-203ENST00000555067 CEP120Q8N960 986 aa10.31□□□□□ -0.76
VRK1-203ENST00000555067 SH2B1Q9NRF2 756 aaPredicted RBP10.31□□□□□ -0.76
VRK1-203ENST00000555067 WNT8BQ93098 351 aa10.3□□□□□ -0.76
VRK1-203ENST00000555067 SCNN1AP37088 669 aa10.29□□□□□ -0.76
VRK1-203ENST00000555067 TTC39BQ5VTQ0 682 aaPredicted RBP10.29□□□□□ -0.76
VRK1-203ENST00000555067 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
VRK1-203ENST00000555067 GPR152Q8TDT2 470 aa10.29□□□□□ -0.76
VRK1-203ENST00000555067 POP1Q99575 1024 aaKnown RBP10.29□□□□□ -0.76
VRK1-203ENST00000555067 WDR64B1ANS9 1081 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 SART1O43290 800 aaKnown RBP10.28□□□□□ -0.76
VRK1-203ENST00000555067 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
VRK1-203ENST00000555067 CYP2E1P05181 493 aaPredicted RBP10.28□□□□□ -0.76
VRK1-203ENST00000555067 PTPRAP18433 802 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 ABI1Q8IZP0 508 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 KCNF1Q9H3M0 494 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 ABI2Q9NYB9 513 aaPredicted RBP10.28□□□□□ -0.76
VRK1-203ENST00000555067 PIM2Q9P1W9 311 aa10.28□□□□□ -0.76
VRK1-203ENST00000555067 H3BRJ5 948 aa10.27□□□□□ -0.77
VRK1-203ENST00000555067 PIP4K2BP78356 416 aa10.27□□□□□ -0.77
VRK1-203ENST00000555067 JAG1P78504 1218 aa10.27□□□□□ -0.77
VRK1-203ENST00000555067 OSGEPQ9NPF4 335 aa10.27□□□□□ -0.77
VRK1-203ENST00000555067 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
VRK1-203ENST00000555067 MSMPQ1L6U9 139 aa10.26□□□□□ -0.77
VRK1-203ENST00000555067 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
VRK1-203ENST00000555067 ZBTB39O15060 712 aa10.25□□□□□ -0.77
VRK1-203ENST00000555067 RPLP1P05386 114 aaKnown RBP10.25□□□□□ -0.77
VRK1-203ENST00000555067 PDE12Q6L8Q7 609 aaKnown RBP10.25□□□□□ -0.77
VRK1-203ENST00000555067 CBLL1Q75N03 491 aa10.25□□□□□ -0.77
VRK1-203ENST00000555067 MEGF11A6BM72 1044 aa10.24□□□□□ -0.77
VRK1-203ENST00000555067 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
VRK1-203ENST00000555067 MFSD14AQ96MC6 490 aa10.24□□□□□ -0.77
VRK1-203ENST00000555067 RUSC1Q9BVN2 902 aa10.24□□□□□ -0.77
VRK1-203ENST00000555067 PRNPP04156 253 aa10.23□□□□□ -0.77
VRK1-203ENST00000555067 OGFOD2Q6N063 350 aa10.23□□□□□ -0.77
VRK1-203ENST00000555067 TMEM88BA6NKF7 163 aa10.22□□□□□ -0.77
VRK1-203ENST00000555067 NFKBIEO00221 500 aa10.22□□□□□ -0.77
VRK1-203ENST00000555067 F13BP05160 661 aa10.22□□□□□ -0.77
VRK1-203ENST00000555067 MAP4P27816 1152 aaKnown RBP10.22□□□□□ -0.77
VRK1-203ENST00000555067 CPSF6Q16630 551 aaKnown RBP eCLIP10.22□□□□□ -0.77
VRK1-203ENST00000555067 NCAPG2Q86XI2 1143 aa10.22□□□□□ -0.77
VRK1-203ENST00000555067 NUDT16Q96DE0 195 aaKnown RBP10.22□□□□□ -0.77
VRK1-203ENST00000555067 KRTAP4-9Q9BYQ8 210 aa10.22□□□□□ -0.77
VRK1-203ENST00000555067 CCDC39Q9UFE4 941 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms