RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 RSBN1LQ6PCB5 846 aaPredicted RBP14.41□□□□□ -0.1
TMEM116-218ENST00000552839 MOB2Q70IA6 237 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 SCAF8Q9UPN6 1271 aaKnown RBP14.41□□□□□ -0.1
TMEM116-218ENST00000552839 ZNF609O15014 1411 aa14.41□□□□□ -0.1
TMEM116-218ENST00000552839 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
TMEM116-218ENST00000552839 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
TMEM116-218ENST00000552839 PKN2Q16513 984 aaKnown RBP14.4□□□□□ -0.1
TMEM116-218ENST00000552839 ZNF296Q8WUU4 475 aaPredicted RBP14.4□□□□□ -0.1
TMEM116-218ENST00000552839 SSH1Q8WYL5 1049 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 GMLQ99445 158 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 ANKIB1Q9P2G1 1089 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 HDAC9Q9UKV0 1011 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 CACNA1FO60840 1977 aa14.4□□□□□ -0.1
TMEM116-218ENST00000552839 RIC3Q7Z5B4 369 aa14.39□□□□□ -0.11
TMEM116-218ENST00000552839 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
TMEM116-218ENST00000552839 FRAT1Q92837 279 aaPredicted RBP14.39□□□□□ -0.11
TMEM116-218ENST00000552839 MYOZ2Q9NPC6 264 aa14.39□□□□□ -0.11
TMEM116-218ENST00000552839 PITPNM2Q9BZ72 1349 aa14.39□□□□□ -0.11
TMEM116-218ENST00000552839 UBE2Q2LH0YL09 131 aa14.38□□□□□ -0.11
TMEM116-218ENST00000552839 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
TMEM116-218ENST00000552839 RARSP54136 660 aaKnown RBP14.38□□□□□ -0.11
TMEM116-218ENST00000552839 FLIIQ13045 1269 aa14.38□□□□□ -0.11
TMEM116-218ENST00000552839 PRAMEF18Q5VWM3 479 aa14.38□□□□□ -0.11
TMEM116-218ENST00000552839 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
TMEM116-218ENST00000552839 ZNF646O15015 1829 aaPredicted RBP14.38□□□□□ -0.11
TMEM116-218ENST00000552839 IPO8O15397 1037 aaKnown RBP14.37□□□□□ -0.11
TMEM116-218ENST00000552839 NEXNQ0ZGT2 675 aa14.37□□□□□ -0.11
TMEM116-218ENST00000552839 USP17L3A6NCW0 530 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 USP17L4A6NCW7 530 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 GPR25O00155 361 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 TM4SF4P48230 202 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 USP17L1Q7RTZ2 530 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
TMEM116-218ENST00000552839 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
TMEM116-218ENST00000552839 PTPRCP08575 1304 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
TMEM116-218ENST00000552839 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
TMEM116-218ENST00000552839 CCDC152Q4G0S7 254 aa14.35□□□□□ -0.11
TMEM116-218ENST00000552839 PODNQ7Z5L7 613 aa14.35□□□□□ -0.11
TMEM116-218ENST00000552839 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
TMEM116-218ENST00000552839 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
TMEM116-218ENST00000552839 CCDC85AQ96PX6 553 aaPredicted RBP14.35□□□□□ -0.11
TMEM116-218ENST00000552839 API5Q9BZZ5 524 aaKnown RBP14.35□□□□□ -0.11
TMEM116-218ENST00000552839 XDHP47989 1333 aa14.35□□□□□ -0.11
TMEM116-218ENST00000552839 WTIPA6NIX2 430 aaPredicted RBP14.34□□□□□ -0.11
TMEM116-218ENST00000552839 PDE8AO60658 829 aa14.34□□□□□ -0.11
TMEM116-218ENST00000552839 BCAR3O75815 825 aa14.34□□□□□ -0.11
TMEM116-218ENST00000552839 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
TMEM116-218ENST00000552839 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
TMEM116-218ENST00000552839 FBXO46Q6PJ61 603 aaPredicted RBP14.34□□□□□ -0.11
TMEM116-218ENST00000552839 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
TMEM116-218ENST00000552839 MYH3P11055 1940 aa14.33□□□□□ -0.11
TMEM116-218ENST00000552839 WNT10BO00744 389 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.12
TMEM116-218ENST00000552839 MS4A1P11836 297 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
TMEM116-218ENST00000552839 ATP2B4P23634 1241 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 TTLL12Q14166 644 aaPredicted RBP14.33□□□□□ -0.12
TMEM116-218ENST00000552839 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 G2E3Q7L622 706 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 ANKRD18AQ8IVF6 992 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 CCDC191Q8NCU4 936 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 MYD88Q99836 296 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 MXD3Q9BW11 206 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
TMEM116-218ENST00000552839 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.12
TMEM116-218ENST00000552839 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
TMEM116-218ENST00000552839 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
TMEM116-218ENST00000552839 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
TMEM116-218ENST00000552839 FKTNO75072 461 aa14.31□□□□□ -0.12
TMEM116-218ENST00000552839 NF2P35240 595 aa14.31□□□□□ -0.12
TMEM116-218ENST00000552839 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
TMEM116-218ENST00000552839 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
TMEM116-218ENST00000552839 DNAAF4Q8WXU2 420 aa14.31□□□□□ -0.12
TMEM116-218ENST00000552839 CFHR5Q9BXR6 569 aa14.31□□□□□ -0.12
TMEM116-218ENST00000552839 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
TMEM116-218ENST00000552839 PRKG1Q13976 671 aa14.3□□□□□ -0.12
TMEM116-218ENST00000552839 OGFOD1Q8N543 542 aa14.3□□□□□ -0.12
TMEM116-218ENST00000552839 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
TMEM116-218ENST00000552839 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
TMEM116-218ENST00000552839 MED23Q9ULK4 1368 aa14.3□□□□□ -0.12
TMEM116-218ENST00000552839 F6X3S4 739 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 ATF7IPQ6VMQ6 1270 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 CLUAP1Q96AJ1 413 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
TMEM116-218ENST00000552839 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
TMEM116-218ENST00000552839 SASH1O94885 1247 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 LAMB1P07942 1786 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 CCT4P50991 539 aaKnown RBP14.28□□□□□ -0.12
TMEM116-218ENST00000552839 CTSWP56202 376 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 LDLRAD1Q5T700 205 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 STRIP1Q5VSL9 837 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms