RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 CXCL9Q07325 125 aa25.49■■□□□ 1.67
C12orf49-203ENST00000547630 G3BP1Q13283 466 aaKnown RBP eCLIP25.49■■□□□ 1.67
C12orf49-203ENST00000547630 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
C12orf49-203ENST00000547630 CIAPIN1Q6FI81 312 aa25.48■■□□□ 1.67
C12orf49-203ENST00000547630 KCNQ5Q9NR82 932 aa25.48■■□□□ 1.67
C12orf49-203ENST00000547630 GPC2Q8N158 579 aa25.47■■□□□ 1.67
C12orf49-203ENST00000547630 COA1Q9GZY4 146 aa25.47■■□□□ 1.67
C12orf49-203ENST00000547630 NMRK2Q9NPI5 230 aa25.47■■□□□ 1.67
C12orf49-203ENST00000547630 SURF6O75683 361 aaKnown RBP25.46■■□□□ 1.67
C12orf49-203ENST00000547630 FGFR2P21802 821 aa25.46■■□□□ 1.67
C12orf49-203ENST00000547630 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
C12orf49-203ENST00000547630 SIRT2Q8IXJ6 389 aa25.46■■□□□ 1.67
C12orf49-203ENST00000547630 RRAGCQ9HB90 399 aa25.46■■□□□ 1.67
C12orf49-203ENST00000547630 TFCP2Q12800 502 aa25.45■■□□□ 1.67
C12orf49-203ENST00000547630 TNIP1Q15025 636 aa25.45■■□□□ 1.67
C12orf49-203ENST00000547630 PODNQ7Z5L7 613 aa25.45■■□□□ 1.67
C12orf49-203ENST00000547630 OS9Q13438 667 aaPredicted RBP25.44■■□□□ 1.66
C12orf49-203ENST00000547630 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 CD209Q9NNX6 404 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 NOP58Q9Y2X3 529 aaKnown RBP25.44■■□□□ 1.66
C12orf49-203ENST00000547630 SCN9AQ15858 1988 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 PSMD14O00487 310 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 HMMRO75330 724 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 IFIT1P09914 478 aaKnown RBP25.44■■□□□ 1.66
C12orf49-203ENST00000547630 SLC5A1P13866 664 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 GYG1P46976 350 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 ATP2B3Q16720 1220 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 LPIN2Q92539 896 aa25.44■■□□□ 1.66
C12orf49-203ENST00000547630 FAM84BQ96KN1 310 aaPredicted RBP25.44■■□□□ 1.66
C12orf49-203ENST00000547630 WDR90Q96KV7 1748 aa25.43■■□□□ 1.66
C12orf49-203ENST00000547630 SASH1O94885 1247 aa25.43■■□□□ 1.66
C12orf49-203ENST00000547630 L3MBTL3Q96JM7 780 aaPredicted RBP25.43■■□□□ 1.66
C12orf49-203ENST00000547630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.43■■□□□ 1.66
C12orf49-203ENST00000547630 POTECB2RU33 542 aa25.42■■□□□ 1.66
C12orf49-203ENST00000547630 HIBADHP31937 336 aaKnown RBP25.42■■□□□ 1.66
C12orf49-203ENST00000547630 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
C12orf49-203ENST00000547630 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
C12orf49-203ENST00000547630 USP17L3A6NCW0 530 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 USP17L4A6NCW7 530 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 VEGFAP15692 232 aaPredicted RBP25.4■■□□□ 1.66
C12orf49-203ENST00000547630 CAVIN4Q5BKX8 364 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 USP17L1Q7RTZ2 530 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 FBXO33Q7Z6M2 555 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 VPS37DQ86XT2 251 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 AKAP2Q9Y2D5 859 aa25.4■■□□□ 1.66
C12orf49-203ENST00000547630 ZBTB12Q9Y330 459 aaPredicted RBP25.4■■□□□ 1.66
C12orf49-203ENST00000547630 VIL1P09327 827 aaKnown RBP25.39■■□□□ 1.65
C12orf49-203ENST00000547630 IL1R1P14778 569 aa25.39■■□□□ 1.65
C12orf49-203ENST00000547630 GMPSP49915 693 aaPredicted RBP25.39■■□□□ 1.65
C12orf49-203ENST00000547630 BCAMP50895 628 aa25.39■■□□□ 1.65
C12orf49-203ENST00000547630 TIMM10P62072 90 aa25.39■■□□□ 1.65
C12orf49-203ENST00000547630 EXOC6Q8TAG9 804 aa25.39■■□□□ 1.65
C12orf49-203ENST00000547630 PCDHB15Q9Y5E8 787 aa25.39■■□□□ 1.65
C12orf49-203ENST00000547630 A0A1B0GUL7 405 aa25.38■■□□□ 1.65
C12orf49-203ENST00000547630 KIF3CO14782 793 aa25.38■■□□□ 1.65
C12orf49-203ENST00000547630 SCNN1DP51172 638 aa25.38■■□□□ 1.65
C12orf49-203ENST00000547630 IRX6P78412 446 aaPredicted RBP25.38■■□□□ 1.65
C12orf49-203ENST00000547630 PSME4Q14997 1843 aa25.38■■□□□ 1.65
C12orf49-203ENST00000547630 GTF2IP78347 998 aa25.37■■□□□ 1.65
C12orf49-203ENST00000547630 TTLL5Q6EMB2 1281 aa25.37■■□□□ 1.65
C12orf49-203ENST00000547630 TDRD7Q8NHU6 1098 aaKnown RBP25.37■■□□□ 1.65
C12orf49-203ENST00000547630 HACL1Q9UJ83 578 aa25.37■■□□□ 1.65
C12orf49-203ENST00000547630 IQCA1LA6NCM1 817 aa25.36■■□□□ 1.65
C12orf49-203ENST00000547630 LMOD1P29536 600 aaPredicted RBP25.36■■□□□ 1.65
C12orf49-203ENST00000547630 ADORA1P30542 326 aa25.36■■□□□ 1.65
C12orf49-203ENST00000547630 HSP90AB4PQ58FF6 505 aa25.36■■□□□ 1.65
C12orf49-203ENST00000547630 STRIP1Q5VSL9 837 aa25.36■■□□□ 1.65
C12orf49-203ENST00000547630 RSBN1LQ6PCB5 846 aaPredicted RBP25.36■■□□□ 1.65
C12orf49-203ENST00000547630 NEUROD6Q96NK8 337 aa25.36■■□□□ 1.65
C12orf49-203ENST00000547630 IQSEC3Q9UPP2 1182 aaPredicted RBP25.36■■□□□ 1.65
C12orf49-203ENST00000547630 EPS15P42566 896 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 DACT2Q5SW24 774 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 ERC1Q8IUD2 1116 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 MXD3Q9BW11 206 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 SCN4AP35499 1836 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 ZNF609O15014 1411 aa25.35■■□□□ 1.65
C12orf49-203ENST00000547630 APBB1O00213 710 aa25.34■■□□□ 1.65
C12orf49-203ENST00000547630 XAGE2Q96GT9 111 aa25.34■■□□□ 1.65
C12orf49-203ENST00000547630 GPR108Q9NPR9 543 aa25.34■■□□□ 1.65
C12orf49-203ENST00000547630 GPRC5DQ9NZD1 345 aa25.34■■□□□ 1.65
C12orf49-203ENST00000547630 JAG2Q9Y219 1238 aa25.34■■□□□ 1.65
C12orf49-203ENST00000547630 FRAT2O75474 233 aaPredicted RBP25.33■■□□□ 1.65
C12orf49-203ENST00000547630 RPS12P25398 132 aaKnown RBP25.33■■□□□ 1.65
C12orf49-203ENST00000547630 TNNI3KQ59H18 835 aa25.33■■□□□ 1.65
C12orf49-203ENST00000547630 DPF2Q92785 391 aa25.33■■□□□ 1.65
C12orf49-203ENST00000547630 TAF1DQ9H5J8 278 aaPredicted RBP25.33■■□□□ 1.65
C12orf49-203ENST00000547630 FPGT-TNNI3KV9GXZ4 949 aa25.33■■□□□ 1.65
C12orf49-203ENST00000547630 ARAP2Q8WZ64 1704 aa25.33■■□□□ 1.65
C12orf49-203ENST00000547630 ZNF646O15015 1829 aaPredicted RBP25.33■■□□□ 1.65
C12orf49-203ENST00000547630 EPHX2P34913 555 aa25.32■■□□□ 1.64
C12orf49-203ENST00000547630 AAMPQ13685 434 aa25.32■■□□□ 1.64
C12orf49-203ENST00000547630 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
C12orf49-203ENST00000547630 RHPN1Q8TCX5 695 aa25.32■■□□□ 1.64
C12orf49-203ENST00000547630 CNOT7Q9UIV1 285 aaKnown RBP25.32■■□□□ 1.64
C12orf49-203ENST00000547630 SHTN1A0MZ66 631 aa25.31■■□□□ 1.64
C12orf49-203ENST00000547630 PHKA1P46020 1223 aa25.31■■□□□ 1.64
C12orf49-203ENST00000547630 AGBL3Q8NEM8 1001 aa25.31■■□□□ 1.64
C12orf49-203ENST00000547630 RAB11FIP3O75154 756 aa25.31■■□□□ 1.64
C12orf49-203ENST00000547630 CHAF1AQ13111 956 aaPredicted RBP25.31■■□□□ 1.64
C12orf49-203ENST00000547630 CCDC102BQ68D86 513 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms