RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
RPS6KC1-207ENST00000543470 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 TM6SF1Q9BZW5 370 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 LTKP29376 864 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 PIK3C2BO00750 1634 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 KIF2AO00139 706 aaPredicted RBP16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
RPS6KC1-207ENST00000543470 DNA2P51530 1060 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 A0A1B0GVL5 298 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 POLA2Q14181 598 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 SNW1Q13573 536 aaKnown RBP16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 XAGE3Q8WTP9 111 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
RPS6KC1-207ENST00000543470 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 USP5P45974 858 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 SPTLC3Q9NUV7 552 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 AKAP2Q9Y2D5 859 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 CTAGE5O15320 804 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 WASF1Q92558 559 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 OGFRQ9NZT2 677 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 TFCP2Q12800 502 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 ELF2Q15723 593 aa16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 ZSCAN16Q9H4T2 348 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 ZNF215Q9UL58 517 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-207ENST00000543470 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 TNRQ92752 1358 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 STARD3NLO95772 234 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 IGHMBP2P38935 993 aaKnown RBP16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 LDHAL6AQ6ZMR3 332 aa16.66■□□□□ 0.26
RPS6KC1-207ENST00000543470 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 C11orf57Q6ZUT1 292 aaPredicted RBP16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 KRT222Q8N1A0 295 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 GOLGA6L10A6NI86 522 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 FEZ1Q99689 392 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 IFNKQ9P0W0 207 aa16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
RPS6KC1-207ENST00000543470 USP6P35125 1406 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 RDXP35241 583 aaKnown RBP16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 KIF5CO60282 957 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 CCDC144BQ3MJ40 725 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 TAX1BP1Q86VP1 789 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
RPS6KC1-207ENST00000543470 NEMFO60524 1076 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 ZSCAN20P17040 1043 aaPredicted RBP16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 SYCP1Q15431 976 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 SEPT11Q9NVA2 429 aaKnown RBP16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 SASH1O94885 1247 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 CHGBP05060 677 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 GTF2F1P35269 517 aaKnown RBP eCLIP16.63■□□□□ 0.255e-6■■■■□ 24.4
RPS6KC1-207ENST00000543470 HSP90AB3PQ58FF7 597 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 PGBD1Q96JS3 809 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 KIAA0754O94854 1291 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 MAP3K12Q12852 859 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 ANKRD13DQ6ZTN6 518 aa16.63■□□□□ 0.25
RPS6KC1-207ENST00000543470 CCDC196A0A1B0GTZ2 297 aa16.62■□□□□ 0.25
RPS6KC1-207ENST00000543470 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
RPS6KC1-207ENST00000543470 GNG11P61952 73 aa16.62■□□□□ 0.25
RPS6KC1-207ENST00000543470 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms