RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 DCPSQ96C86 337 aaKnown RBP12.89□□□□□ -0.35
NPIPB4-217ENST00000543449 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
NPIPB4-217ENST00000543449 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 BICC1Q9H694 974 aaKnown RBP12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
NPIPB4-217ENST00000543449 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
NPIPB4-217ENST00000543449 GNAI3P08754 354 aa12.87□□□□□ -0.35
NPIPB4-217ENST00000543449 HTRA3P83110 453 aa12.87□□□□□ -0.35
NPIPB4-217ENST00000543449 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
NPIPB4-217ENST00000543449 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
NPIPB4-217ENST00000543449 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 ECE1P42892 770 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 INTS3Q68E01 1043 aaKnown RBP12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 GMLQ99445 158 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 ABT1Q9ULW3 272 aaKnown RBP12.86□□□□□ -0.35
NPIPB4-217ENST00000543449 TAF5LO75529 589 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 IL1R1P14778 569 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 HIRAP54198 1017 aaPredicted RBP12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 DEFB115Q30KQ5 88 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 CAVIN4Q5BKX8 364 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 ZNF594Q96JF6 807 aaPredicted RBP12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
NPIPB4-217ENST00000543449 PSME4Q14997 1843 aa12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 PLIN1O60240 522 aa12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
NPIPB4-217ENST00000543449 CIAO1O76071 339 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 SASH1O94885 1247 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 PDE8BO95263 885 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 IFIT1P09914 478 aaKnown RBP12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 GTF2IP78347 998 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
NPIPB4-217ENST00000543449 SHTN1A0MZ66 631 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 EYA2O00167 538 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 SCARF1Q14162 830 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 C2orf69Q8N8R5 385 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
NPIPB4-217ENST00000543449 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 TRAF5O00463 557 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 MYO1BO43795 1136 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 MS4A1P11836 297 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 TRIM27P14373 513 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 KLRK1P26718 216 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 FKBP1BP68106 108 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 CST9Q5W186 159 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 TDRD7Q8NHU6 1098 aaKnown RBP12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 PUS3Q9BZE2 481 aaKnown RBP12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 FAM205AQ6ZU69 1335 aa12.81□□□□□ -0.36
NPIPB4-217ENST00000543449 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 FRAT2O75474 233 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 BCAR3O75815 825 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 SLC5A1P13866 664 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 NF2P35240 595 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 VEGFBP49765 207 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 FTSJ3Q8IY81 847 aaKnown RBP12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
NPIPB4-217ENST00000543449 LPIN2Q92539 896 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms