RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
SCARB1-207ENST00000541661 MMP14P50281 582 aa16.85■□□□□ 0.29
SCARB1-207ENST00000541661 DACT2Q5SW24 774 aa16.85■□□□□ 0.29
SCARB1-207ENST00000541661 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
SCARB1-207ENST00000541661 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
SCARB1-207ENST00000541661 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
SCARB1-207ENST00000541661 STRIP1Q5VSL9 837 aa16.84■□□□□ 0.29
SCARB1-207ENST00000541661 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
SCARB1-207ENST00000541661 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
SCARB1-207ENST00000541661 GREM2Q9H772 168 aa16.84■□□□□ 0.29
SCARB1-207ENST00000541661 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.28
SCARB1-207ENST00000541661 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
SCARB1-207ENST00000541661 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.28
SCARB1-207ENST00000541661 COA1Q9GZY4 146 aa16.83■□□□□ 0.28
SCARB1-207ENST00000541661 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 H7C1W4 665 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 WNT10BO00744 389 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 MOB2Q70IA6 237 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 LEMD3Q9Y2U8 911 aa16.82■□□□□ 0.28
SCARB1-207ENST00000541661 TM4SF4P48230 202 aa16.81■□□□□ 0.28
SCARB1-207ENST00000541661 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
SCARB1-207ENST00000541661 TXNRD3Q86VQ6 643 aa16.81■□□□□ 0.28
SCARB1-207ENST00000541661 MXD3Q9BW11 206 aa16.81■□□□□ 0.28
SCARB1-207ENST00000541661 PLA2G12BQ9BX93 195 aa16.81■□□□□ 0.28
SCARB1-207ENST00000541661 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
SCARB1-207ENST00000541661 SOX10P56693 466 aa16.8■□□□□ 0.28
SCARB1-207ENST00000541661 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
SCARB1-207ENST00000541661 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
SCARB1-207ENST00000541661 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
SCARB1-207ENST00000541661 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
SCARB1-207ENST00000541661 NF2P35240 595 aa16.79■□□□□ 0.28
SCARB1-207ENST00000541661 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
SCARB1-207ENST00000541661 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
SCARB1-207ENST00000541661 ANKRD2Q9GZV1 360 aa16.79■□□□□ 0.28
SCARB1-207ENST00000541661 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 CSF1RP07333 972 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 G2E3Q7L622 706 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 ZNF296Q8WUU4 475 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-207ENST00000541661 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
SCARB1-207ENST00000541661 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-207ENST00000541661 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 HPS5Q9UPZ3 1129 aa16.78■□□□□ 0.28
SCARB1-207ENST00000541661 CACNA1FO60840 1977 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 TBC1D8O95759 1140 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 ITGA6P23229 1130 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 CASP7P55210 303 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-207ENST00000541661 GCKRQ14397 625 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 TWISTNBQ3B726 338 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-207ENST00000541661 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.28
SCARB1-207ENST00000541661 FBXW7Q969H0 707 aa16.77■□□□□ 0.28
SCARB1-207ENST00000541661 SASH1O94885 1247 aa16.76■□□□□ 0.27
SCARB1-207ENST00000541661 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
SCARB1-207ENST00000541661 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
SCARB1-207ENST00000541661 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
SCARB1-207ENST00000541661 GPR25O00155 361 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 KLRK1P26718 216 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
SCARB1-207ENST00000541661 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SCARB1-207ENST00000541661 ARMC9Q7Z3E5 817 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 MPHOSPH8Q99549 860 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
SCARB1-207ENST00000541661 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-207ENST00000541661 IL16Q14005 1332 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 GTF2IP78347 998 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 CHRNDQ07001 517 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 FLIIQ13045 1269 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
SCARB1-207ENST00000541661 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 ECM29Q5VYK3 1845 aa16.74■□□□□ 0.27
SCARB1-207ENST00000541661 IRS2Q9Y4H2 1338 aa16.73■□□□□ 0.27
SCARB1-207ENST00000541661 SPRYD7Q5W111 196 aa16.73■□□□□ 0.27
SCARB1-207ENST00000541661 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
SCARB1-207ENST00000541661 CD209Q9NNX6 404 aa16.73■□□□□ 0.27
SCARB1-207ENST00000541661 LAMB1P07942 1786 aa16.73■□□□□ 0.27
SCARB1-207ENST00000541661 A0A1B0GUL6 1792 aa16.72■□□□□ 0.27
SCARB1-207ENST00000541661 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
SCARB1-207ENST00000541661 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-207ENST00000541661 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 FKTNO75072 461 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 KCNJ4P48050 445 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 INHBEP58166 350 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
SCARB1-207ENST00000541661 PRKG1Q13976 671 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 ANGEL1Q9UNK9 670 aaKnown RBP16.71■□□□□ 0.27
SCARB1-207ENST00000541661 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
SCARB1-207ENST00000541661 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms