RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 BSDC1Q9NW68 430 aaPredicted RBP15.77■□□□□ 0.12
SNHG1-216ENST00000541416 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
SNHG1-216ENST00000541416 STRIP1Q5VSL9 837 aa15.76■□□□□ 0.11
SNHG1-216ENST00000541416 COA1Q9GZY4 146 aa15.76■□□□□ 0.11
SNHG1-216ENST00000541416 HPS5Q9UPZ3 1129 aa15.76■□□□□ 0.11
SNHG1-216ENST00000541416 MAP3K2Q9Y2U5 619 aa15.76■□□□□ 0.11
SNHG1-216ENST00000541416 UBE2Q2LH0YL09 131 aa15.75■□□□□ 0.11
SNHG1-216ENST00000541416 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
SNHG1-216ENST00000541416 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
SNHG1-216ENST00000541416 PRPF38BQ5VTL8 546 aaKnown RBP15.75■□□□□ 0.11
SNHG1-216ENST00000541416 ARMC9Q7Z3E5 817 aa15.75■□□□□ 0.11
SNHG1-216ENST00000541416 APOBEC3FQ8IUX4 373 aaKnown RBP15.75■□□□□ 0.11
SNHG1-216ENST00000541416 STK31Q9BXU1 1019 aa15.75■□□□□ 0.11
SNHG1-216ENST00000541416 MINPP1Q9UNW1 487 aa15.75■□□□□ 0.11
SNHG1-216ENST00000541416 LEMD3Q9Y2U8 911 aa15.75■□□□□ 0.11
SNHG1-216ENST00000541416 TM4SF4P48230 202 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 NBPF9Q3BBW0 867 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 DACT2Q5SW24 774 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 KSR2Q6VAB6 950 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 TTLL11Q8NHH1 800 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
SNHG1-216ENST00000541416 JARID2Q92833 1246 aaPredicted RBP15.74■□□□□ 0.11
SNHG1-216ENST00000541416 ANKRD2Q9GZV1 360 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 MYH3P11055 1940 aa15.74■□□□□ 0.11
SNHG1-216ENST00000541416 WNT10BO00744 389 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 APAF1O14727 1248 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 TBC1D8O95759 1140 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 ALDH1A1P00352 501 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 MOB2Q70IA6 237 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 GREM2Q9H772 168 aa15.73■□□□□ 0.11
SNHG1-216ENST00000541416 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 GPR25O00155 361 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 PRAMEF18Q5VWM3 479 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 TTLL5Q6EMB2 1281 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 FBXO46Q6PJ61 603 aaPredicted RBP15.72■□□□□ 0.11
SNHG1-216ENST00000541416 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 C8orf58Q8NAV2 365 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
SNHG1-216ENST00000541416 FKTNO75072 461 aa15.71■□□□□ 0.11
SNHG1-216ENST00000541416 KCNJ4P48050 445 aa15.71■□□□□ 0.11
SNHG1-216ENST00000541416 INHBEP58166 350 aa15.71■□□□□ 0.11
SNHG1-216ENST00000541416 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
SNHG1-216ENST00000541416 SPEF2Q9C093 1822 aa15.71■□□□□ 0.1
SNHG1-216ENST00000541416 ZNF804BA4D1E1 1349 aa15.7■□□□□ 0.1
SNHG1-216ENST00000541416 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
SNHG1-216ENST00000541416 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
SNHG1-216ENST00000541416 CFHR5Q9BXR6 569 aa15.7■□□□□ 0.1
SNHG1-216ENST00000541416 COL1A1P02452 1464 aaPredicted RBP15.7■□□□□ 0.1
SNHG1-216ENST00000541416 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
SNHG1-216ENST00000541416 MYO1BO43795 1136 aa15.69■□□□□ 0.1
SNHG1-216ENST00000541416 SASH1O94885 1247 aa15.69■□□□□ 0.1
SNHG1-216ENST00000541416 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
SNHG1-216ENST00000541416 MYH16Q9H6N6 1097 aa15.69■□□□□ 0.1
SNHG1-216ENST00000541416 MANSC4A6NHS7 340 aaPredicted RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 GTF2IP78347 998 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 GCC1Q96CN9 775 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 SLC10A4Q96EP9 437 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
SNHG1-216ENST00000541416 PPP2R3BQ9Y5P8 575 aa15.68■□□□□ 0.1
SNHG1-216ENST00000541416 UNCXA6NJT0 531 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 H7C1W4 665 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 ITGA6P23229 1130 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 PRKG1Q13976 671 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 LDLRAD1Q5T700 205 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 SPRYD7Q5W111 196 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 PLA2G12BQ9BX93 195 aa15.67■□□□□ 0.1
SNHG1-216ENST00000541416 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
SNHG1-216ENST00000541416 ZBTB48P10074 688 aaPredicted RBP15.66■□□□□ 0.1
SNHG1-216ENST00000541416 SUPT20HL1Q3ZLR7 823 aa15.66■□□□□ 0.1
SNHG1-216ENST00000541416 INTS3Q68E01 1043 aaKnown RBP15.66■□□□□ 0.1
SNHG1-216ENST00000541416 OTUD7BQ6GQQ9 843 aa15.66■□□□□ 0.1
SNHG1-216ENST00000541416 DEFB129Q9H1M3 183 aa15.66■□□□□ 0.1
SNHG1-216ENST00000541416 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
SNHG1-216ENST00000541416 GCKRQ14397 625 aa15.65■□□□□ 0.1
SNHG1-216ENST00000541416 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
SNHG1-216ENST00000541416 TXNRD3Q86VQ6 643 aa15.65■□□□□ 0.1
SNHG1-216ENST00000541416 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
SNHG1-216ENST00000541416 ZNF646O15015 1829 aaPredicted RBP15.64■□□□□ 0.09
SNHG1-216ENST00000541416 ANKRD18BA2A2Z9 1011 aa15.64■□□□□ 0.09
SNHG1-216ENST00000541416 CHRNDQ07001 517 aa15.64■□□□□ 0.09
SNHG1-216ENST00000541416 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
SNHG1-216ENST00000541416 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
SNHG1-216ENST00000541416 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
SNHG1-216ENST00000541416 CSF1RP07333 972 aa15.63■□□□□ 0.09
SNHG1-216ENST00000541416 FKBP5Q13451 457 aaPredicted RBP15.63■□□□□ 0.09
SNHG1-216ENST00000541416 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
SNHG1-216ENST00000541416 IFNL1Q8IU54 200 aa15.63■□□□□ 0.09
SNHG1-216ENST00000541416 LINS1Q8NG48 757 aa15.63■□□□□ 0.09
SNHG1-216ENST00000541416 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
SNHG1-216ENST00000541416 ZBED3Q96IU2 234 aaPredicted RBP15.63■□□□□ 0.09
SNHG1-216ENST00000541416 TRIM17Q9Y577 477 aa15.63■□□□□ 0.09
SNHG1-216ENST00000541416 IREB2P48200 963 aaKnown RBP15.62■□□□□ 0.09
SNHG1-216ENST00000541416 FKBP1AP62942 108 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms