RNA–Protein interactions for RNA: ENST00000541364.5

TUBA1C-202, Transcript of tubulin alpha 1c, humanhuman

TSL 2 BASIC

Gene TUBA1C, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-202ENST00000541364 CPA1P15085 419 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 PROM2Q8N271 834 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 LRRC4BQ9NT99 713 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 TUBB4AP04350 444 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 TNNT1P13805 278 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 ZNF165P49910 485 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 SIK1P57059 783 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■■■□□ 14.8
TUBA1C-202ENST00000541364 NMIQ13287 307 aaPredicted RBP12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 ITPK1Q13572 414 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 AACSQ86V21 672 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 CHPF2Q9P2E5 772 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
TUBA1C-202ENST00000541364 SIPA1L3O60292 1781 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 MYH15Q9Y2K3 1946 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 GOLGA6L19H0YKK7 550 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 ANXA1P04083 346 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 TSC1Q92574 1164 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 PRDM10Q9NQV6 1147 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 CLIP2Q9UDT6 1046 aa12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-202ENST00000541364 RESTQ13127 1097 aa12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 STX1AQ16623 288 aa12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
TUBA1C-202ENST00000541364 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 TOB2Q14106 344 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 SLFNL1Q499Z3 407 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 NAA16Q6N069 864 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 ARID3AQ99856 593 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 CTNNA3Q9UI47 895 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 A1BGP04217 495 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 GSDMDP57764 484 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 CAMK4Q16566 473 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 CKAP2LQ8IYA6 745 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 FSD1Q9BTV5 496 aa12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-202ENST00000541364 GRM8O00222 908 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 BAG6P46379 1132 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 IQCB1Q15051 598 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 ZNF397Q8NF99 534 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 ANO10Q9NW15 660 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
TUBA1C-202ENST00000541364 H3BQV1 296 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 MYL6BP14649 208 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 KCNJ6P48051 423 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 TPRNQ4KMQ1 711 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 AMIGO3Q86WK7 504 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 C16orf45Q96MC5 204 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
TUBA1C-202ENST00000541364 NR1I2O75469 434 aa12.07□□□□□ -0.48
TUBA1C-202ENST00000541364 TAF5LO75529 589 aa12.07□□□□□ -0.48
TUBA1C-202ENST00000541364 SASH1O94885 1247 aa12.07□□□□□ -0.48
TUBA1C-202ENST00000541364 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
TUBA1C-202ENST00000541364 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms