RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ANKRD13AQ8IZ07 590 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 SCARF2Q96GP6 870 aaPredicted RBP8.66□□□□□ -1.02
MRE11-209ENST00000540013 NSUN5Q96P11 429 aaKnown RBP8.66□□□□□ -1.02
MRE11-209ENST00000540013 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 MKL2Q9ULH7 1088 aa8.66□□□□□ -1.02
MRE11-209ENST00000540013 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
MRE11-209ENST00000540013 LILRB5O75023 590 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
MRE11-209ENST00000540013 EDN3P14138 238 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 CPB1P15086 417 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 CACTIN-AS1Q8N1I8 211 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 BEND7Q8N7W2 519 aaPredicted RBP8.65□□□□□ -1.02
MRE11-209ENST00000540013 C1orf127Q8N9H9 656 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 TTC9Q92623 222 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 ADAMTS8Q9UP79 889 aa8.65□□□□□ -1.02
MRE11-209ENST00000540013 ZBTB42B2RXF5 422 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 GPR182O15218 404 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 TREHO43280 583 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 CPNE3O75131 537 aaKnown RBP8.64□□□□□ -1.03
MRE11-209ENST00000540013 MLLT1Q03111 559 aaPredicted RBP8.64□□□□□ -1.03
MRE11-209ENST00000540013 PSAPL1Q6NUJ1 521 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 UBXN4Q92575 508 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 BCL2L13Q9BXK5 485 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 CNTN3Q9P232 1028 aa8.64□□□□□ -1.03
MRE11-209ENST00000540013 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
MRE11-209ENST00000540013 M0R082 166 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 DGKGP49619 791 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 FGD1P98174 961 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 ZNF417Q8TAU3 575 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 ZNF587Q96SQ5 575 aaPredicted RBP8.63□□□□□ -1.03
MRE11-209ENST00000540013 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 CHRDQ9H2X0 955 aa8.63□□□□□ -1.03
MRE11-209ENST00000540013 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
MRE11-209ENST00000540013 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
MRE11-209ENST00000540013 SPDYE3A6NKU9 549 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 GNB5O14775 395 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 SMNDC1O75940 238 aaKnown RBP eCLIP8.62□□□□□ -1.03
MRE11-209ENST00000540013 IGHA2P01877 340 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 ALBP02768 609 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
MRE11-209ENST00000540013 COL19A1Q14993 1142 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 PERM1Q5SV97 790 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 HFE2Q6ZVN8 426 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 PLD4Q96BZ4 506 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 SALL4Q9UJQ4 1053 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
MRE11-209ENST00000540013 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
MRE11-209ENST00000540013 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
MRE11-209ENST00000540013 VAMP1P23763 118 aa8.61□□□□□ -1.03
MRE11-209ENST00000540013 C20orf204Q6ZNR8 217 aa8.61□□□□□ -1.03
MRE11-209ENST00000540013 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
MRE11-209ENST00000540013 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
MRE11-209ENST00000540013 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
MRE11-209ENST00000540013 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
MRE11-209ENST00000540013 J3QW42 95 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
MRE11-209ENST00000540013 EREGO14944 169 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 ATP2B2Q01814 1243 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 DSC3Q14574 896 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
MRE11-209ENST00000540013 GPAT2Q6NUI2 795 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 CEP120Q8N960 986 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
MRE11-209ENST00000540013 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
MRE11-209ENST00000540013 ORC1Q13415 861 aa8.59□□□□□ -1.03
MRE11-209ENST00000540013 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
MRE11-209ENST00000540013 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
MRE11-209ENST00000540013 GALNT12Q8IXK2 581 aa8.59□□□□□ -1.03
MRE11-209ENST00000540013 GIPC2Q8TF65 315 aa8.59□□□□□ -1.03
MRE11-209ENST00000540013 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
MRE11-209ENST00000540013 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
MRE11-209ENST00000540013 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
MRE11-209ENST00000540013 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
MRE11-209ENST00000540013 ANKRD33BA6NCL7 494 aa8.57□□□□□ -1.04
MRE11-209ENST00000540013 HOXB4P17483 251 aaPredicted RBP8.57□□□□□ -1.04
MRE11-209ENST00000540013 AFF1P51825 1210 aaKnown RBP8.57□□□□□ -1.04
MRE11-209ENST00000540013 SNRPNP63162 240 aaKnown RBP8.57□□□□□ -1.04
MRE11-209ENST00000540013 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
MRE11-209ENST00000540013 CEP135Q66GS9 1140 aa8.57□□□□□ -1.04
MRE11-209ENST00000540013 ALG1LQ6GMV1 187 aa8.57□□□□□ -1.04
MRE11-209ENST00000540013 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
MRE11-209ENST00000540013 TOPBP1Q92547 1522 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 PTPRAP18433 802 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 MAPK8P45983 427 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 LINC00114Q6XXX2 140 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 CCDC74AQ96AQ1 378 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 OSMRQ99650 979 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 DZANK1Q9NVP4 752 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 NLRP2Q9NX02 1062 aa8.56□□□□□ -1.04
MRE11-209ENST00000540013 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
MRE11-209ENST00000540013 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
MRE11-209ENST00000540013 IGHA1P01876 353 aa8.55□□□□□ -1.04
MRE11-209ENST00000540013 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms