RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PHAXQ9H814 394 aaKnown RBP15.07■□□□□ 0
CLSTN3-209ENST00000539982 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
CLSTN3-209ENST00000539982 ALDH1A1P00352 501 aa15.06■□□□□ 0
CLSTN3-209ENST00000539982 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
CLSTN3-209ENST00000539982 MXD3Q9BW11 206 aa15.06■□□□□ 0
CLSTN3-209ENST00000539982 R3HDMLQ9H3Y0 253 aa15.06■□□□□ 0
CLSTN3-209ENST00000539982 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
CLSTN3-209ENST00000539982 MYO3BQ8WXR4 1341 aa15.06■□□□□ 0
CLSTN3-209ENST00000539982 LDLRAD1Q5T700 205 aa15.05■□□□□ -0
CLSTN3-209ENST00000539982 SPRYD7Q5W111 196 aa15.05■□□□□ -0
CLSTN3-209ENST00000539982 CDC5LQ99459 802 aaKnown RBP15.05■□□□□ -0
CLSTN3-209ENST00000539982 MINPP1Q9UNW1 487 aa15.05■□□□□ -0
CLSTN3-209ENST00000539982 MED23Q9ULK4 1368 aa15.05■□□□□ -0
CLSTN3-209ENST00000539982 INHBEP58166 350 aa15.04■□□□□ -0
CLSTN3-209ENST00000539982 PRKG1Q13976 671 aa15.04■□□□□ -0
CLSTN3-209ENST00000539982 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
CLSTN3-209ENST00000539982 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
CLSTN3-209ENST00000539982 COA1Q9GZY4 146 aa15.04■□□□□ -0
CLSTN3-209ENST00000539982 MBIPQ9NS73 344 aa15.04■□□□□ -0
CLSTN3-209ENST00000539982 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
CLSTN3-209ENST00000539982 CCT4P50991 539 aaKnown RBP15.03■□□□□ -0
CLSTN3-209ENST00000539982 HABP4Q5JVS0 413 aaKnown RBP15.03■□□□□ -0
CLSTN3-209ENST00000539982 APOBEC3FQ8IUX4 373 aaKnown RBP15.03■□□□□ -0
CLSTN3-209ENST00000539982 FBXW7Q969H0 707 aa15.03■□□□□ -0
CLSTN3-209ENST00000539982 MANSC4A6NHS7 340 aaPredicted RBP15.02■□□□□ -0
CLSTN3-209ENST00000539982 SASH1O94885 1247 aa15.02■□□□□ -0
CLSTN3-209ENST00000539982 ZNF853P0CG23 659 aa15.02■□□□□ -0
CLSTN3-209ENST00000539982 TTLL5Q6EMB2 1281 aa15.02■□□□□ -0
CLSTN3-209ENST00000539982 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
CLSTN3-209ENST00000539982 SLC10A4Q96EP9 437 aa15.02■□□□□ -0
CLSTN3-209ENST00000539982 ANGEL1Q9UNK9 670 aaKnown RBP15.02■□□□□ -0
CLSTN3-209ENST00000539982 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 CTSWP56202 376 aa15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 IFNL1Q8IU54 200 aa15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 ZBED3Q96IU2 234 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 LEMD3Q9Y2U8 911 aa15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 TRIM17Q9Y577 477 aa15.01□□□□□ -0.01
CLSTN3-209ENST00000539982 POTEFA5A3E0 1075 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 ZBTB48P10074 688 aaPredicted RBP15□□□□□ -0.01
CLSTN3-209ENST00000539982 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
CLSTN3-209ENST00000539982 MAP3K11Q16584 847 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 OTOP1Q7RTM1 612 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 KIAA0825Q8IV33 1275 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 DEFB129Q9H1M3 183 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 GREM2Q9H772 168 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
CLSTN3-209ENST00000539982 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
CLSTN3-209ENST00000539982 MAP3K2Q9Y2U5 619 aa14.99□□□□□ -0.01
CLSTN3-209ENST00000539982 ZNF804BA4D1E1 1349 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 UNCXA6NJT0 531 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 GNAI1P63096 354 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 GTF2IP78347 998 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 KSR2Q6VAB6 950 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 ERO1AQ96HE7 468 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 IFT57Q9NWB7 429 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 FZD1Q9UP38 647 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 PTPN22Q9Y2R2 807 aa14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 ZNF646O15015 1829 aaPredicted RBP14.98□□□□□ -0.01
CLSTN3-209ENST00000539982 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 IGF2BP3O00425 579 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 PPP1R12BO60237 982 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 IGHMBP2P38935 993 aaKnown RBP14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 DLGAP5Q15398 846 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 CCDC30Q5VVM6 783 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 OTUD7BQ6GQQ9 843 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 C8orf58Q8NAV2 365 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 WNK4Q96J92 1243 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 ANKRD2Q9GZV1 360 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 PPP2R3BQ9Y5P8 575 aa14.97□□□□□ -0.01
CLSTN3-209ENST00000539982 COL1A1P02452 1464 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 SUPT20HL1Q3ZLR7 823 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 MTMR14Q8NCE2 650 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 CLMNQ96JQ2 1002 aa14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-209ENST00000539982 H7C1W4 665 aa14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 KLRK1P26718 216 aa14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 ARMC5Q96C12 935 aa14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 CD209Q9NNX6 404 aa14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 HTTP42858 3142 aa14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 MKI67P46013 3256 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-209ENST00000539982 EN2P19622 333 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-209ENST00000539982 CRHR2Q13324 411 aa14.94□□□□□ -0.02
CLSTN3-209ENST00000539982 CD99L2Q8TCZ2 262 aa14.94□□□□□ -0.02
CLSTN3-209ENST00000539982 MPHOSPH8Q99549 860 aa14.94□□□□□ -0.02
CLSTN3-209ENST00000539982 EFCC1Q9HA90 598 aa14.94□□□□□ -0.02
CLSTN3-209ENST00000539982 NEURL1BA8MQ27 555 aa14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 MYO1BO43795 1136 aa14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 USP2O75604 605 aaPredicted RBP14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 ITGA6P23229 1130 aa14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 KCNJ4P48050 445 aa14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 SP3Q02447 781 aa14.93□□□□□ -0.02
CLSTN3-209ENST00000539982 CWF19L2Q2TBE0 894 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms