RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 C2orf69Q8N8R5 385 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 MXD3Q9BW11 206 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
USP28-203ENST00000537490 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
USP28-203ENST00000537490 MED23Q9ULK4 1368 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
USP28-203ENST00000537490 FAM155AB1AL88 458 aaPredicted RBP10.81□□□□□ -0.68
USP28-203ENST00000537490 ITGA6P23229 1130 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 IGHMBP2P38935 993 aaKnown RBP10.81□□□□□ -0.68
USP28-203ENST00000537490 NOGQ13253 232 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 LINS1Q8NG48 757 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 CDCA5Q96FF9 252 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 MYOZ2Q9NPC6 264 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 ZNF609O15014 1411 aa10.81□□□□□ -0.68
USP28-203ENST00000537490 F6X3S4 739 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 CA12O43570 354 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
USP28-203ENST00000537490 KLRK1P26718 216 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 KIF23Q02241 960 aaPredicted RBP10.8□□□□□ -0.68
USP28-203ENST00000537490 DACT2Q5SW24 774 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 COA1Q9GZY4 146 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 MYH16Q9H6N6 1097 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 SCAF8Q9UPN6 1271 aaKnown RBP10.8□□□□□ -0.68
USP28-203ENST00000537490 LEMD3Q9Y2U8 911 aa10.8□□□□□ -0.68
USP28-203ENST00000537490 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
USP28-203ENST00000537490 ZNF157P51786 506 aaPredicted RBP10.79□□□□□ -0.68
USP28-203ENST00000537490 NBPF9Q3BBW0 867 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 BEND3Q5T5X7 828 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 MPHOSPH8Q99549 860 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 ANKRD2Q9GZV1 360 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
USP28-203ENST00000537490 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
USP28-203ENST00000537490 POLR2AP24928 1970 aaKnown RBP10.78□□□□□ -0.68
USP28-203ENST00000537490 SNAP23O00161 211 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 FOXO4P98177 505 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 CHRNDQ07001 517 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 STRIP1Q5VSL9 837 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 FAM9BQ8IZU0 186 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 PITPNM2Q9BZ72 1349 aa10.78□□□□□ -0.68
USP28-203ENST00000537490 ANKRD18BA2A2Z9 1011 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 WNT10BO00744 389 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 TAF5LO75529 589 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 SLC10A3P09131 477 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 GTF2IP78347 998 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 EPHA10Q5JZY3 1008 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 MOB2Q70IA6 237 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
USP28-203ENST00000537490 CSRNP1Q96S65 589 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
USP28-203ENST00000537490 CCDC85CA6NKD9 419 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 UBE2Q2LH0YL09 131 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
USP28-203ENST00000537490 KCNJ4P48050 445 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 RASAL3Q86YV0 1011 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 KIAA0825Q8IV33 1275 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 OGFOD1Q8N543 542 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 CD209Q9NNX6 404 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 RNF186Q9NXI6 227 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 MYO3BQ8WXR4 1341 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 IRS2Q9Y4H2 1338 aa10.76□□□□□ -0.69
USP28-203ENST00000537490 TRPA1O75762 1119 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 SASH1O94885 1247 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 FKBP1BP68106 108 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 IFIT5Q13325 482 aaKnown RBP10.75□□□□□ -0.69
USP28-203ENST00000537490 DGKZQ13574 1117 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 LMBR1LQ6UX01 489 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 ZBED3Q96IU2 234 aaPredicted RBP10.75□□□□□ -0.69
USP28-203ENST00000537490 ZNF594Q96JF6 807 aaPredicted RBP10.75□□□□□ -0.69
USP28-203ENST00000537490 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
USP28-203ENST00000537490 GRM8O00222 908 aa10.74□□□□□ -0.69
USP28-203ENST00000537490 CACNB1Q02641 598 aaPredicted RBP10.74□□□□□ -0.69
USP28-203ENST00000537490 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
USP28-203ENST00000537490 CERS5Q8N5B7 392 aa10.74□□□□□ -0.69
USP28-203ENST00000537490 SAGE1Q9NXZ1 904 aa10.74□□□□□ -0.69
USP28-203ENST00000537490 HDAC9Q9UKV0 1011 aa10.74□□□□□ -0.69
USP28-203ENST00000537490 PSME4Q14997 1843 aa10.74□□□□□ -0.69
USP28-203ENST00000537490 PLIN1O60240 522 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 ALDH1L1O75891 902 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 MMP14P50281 582 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 TTLL12Q14166 644 aaPredicted RBP10.73□□□□□ -0.69
USP28-203ENST00000537490 SLC4A10Q6U841 1118 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 LDHAL6AQ6ZMR3 332 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
USP28-203ENST00000537490 PCDHAC2Q9Y5I4 1007 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 MYH3P11055 1940 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
USP28-203ENST00000537490 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
USP28-203ENST00000537490 IL1R1P14778 569 aa10.72□□□□□ -0.69
USP28-203ENST00000537490 RGS19P49795 217 aa10.72□□□□□ -0.69
USP28-203ENST00000537490 PRKG1Q13976 671 aa10.72□□□□□ -0.69
USP28-203ENST00000537490 CCDC57Q2TAC2 916 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms