RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SCN9AQ15858 1988 aa22.27■■□□□ 1.16
DDX55-204ENST00000536079 PDE8BO95263 885 aa22.27■■□□□ 1.16
DDX55-204ENST00000536079 C15orf52Q6ZUT6 534 aaKnown RBP22.27■■□□□ 1.16
DDX55-204ENST00000536079 SSH3Q8TE77 659 aa22.27■■□□□ 1.16
DDX55-204ENST00000536079 ZBTB12Q9Y330 459 aaPredicted RBP22.27■■□□□ 1.16
DDX55-204ENST00000536079 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
DDX55-204ENST00000536079 FGFR2P21802 821 aa22.26■■□□□ 1.15
DDX55-204ENST00000536079 SCNN1DP51172 638 aa22.26■■□□□ 1.15
DDX55-204ENST00000536079 UBE4AQ14139 1066 aa22.26■■□□□ 1.15
DDX55-204ENST00000536079 SIRT2Q8IXJ6 389 aa22.26■■□□□ 1.15
DDX55-204ENST00000536079 G3V3G9 751 aa22.25■■□□□ 1.15
DDX55-204ENST00000536079 GYG1P46976 350 aa22.25■■□□□ 1.15
DDX55-204ENST00000536079 GMPSP49915 693 aaPredicted RBP22.25■■□□□ 1.15
DDX55-204ENST00000536079 DCAF8Q5TAQ9 597 aa22.25■■□□□ 1.15
DDX55-204ENST00000536079 MXD3Q9BW11 206 aa22.25■■□□□ 1.15
DDX55-204ENST00000536079 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
DDX55-204ENST00000536079 FAM84BQ96KN1 310 aaPredicted RBP22.24■■□□□ 1.15
DDX55-204ENST00000536079 COA1Q9GZY4 146 aa22.24■■□□□ 1.15
DDX55-204ENST00000536079 CD209Q9NNX6 404 aa22.24■■□□□ 1.15
DDX55-204ENST00000536079 FBXO3Q9UK99 471 aa22.24■■□□□ 1.15
DDX55-204ENST00000536079 POTEIP0CG38 1075 aa22.23■■□□□ 1.15
DDX55-204ENST00000536079 POTEJP0CG39 1038 aa22.23■■□□□ 1.15
DDX55-204ENST00000536079 IL15P40933 162 aaPredicted RBP22.23■■□□□ 1.15
DDX55-204ENST00000536079 EPS15P42566 896 aa22.23■■□□□ 1.15
DDX55-204ENST00000536079 TNIP1Q15025 636 aa22.23■■□□□ 1.15
DDX55-204ENST00000536079 PODNQ7Z5L7 613 aa22.23■■□□□ 1.15
DDX55-204ENST00000536079 VIL1P09327 827 aaKnown RBP22.22■■□□□ 1.15
DDX55-204ENST00000536079 TFCP2Q12800 502 aa22.22■■□□□ 1.15
DDX55-204ENST00000536079 CRBNQ96SW2 442 aa22.22■■□□□ 1.15
DDX55-204ENST00000536079 TAF1DQ9H5J8 278 aaPredicted RBP22.22■■□□□ 1.15
DDX55-204ENST00000536079 CEP126Q9P2H0 1117 aa22.22■■□□□ 1.15
DDX55-204ENST00000536079 SUPT16HQ9Y5B9 1047 aaKnown RBP22.22■■□□□ 1.15
DDX55-204ENST00000536079 SASH1O94885 1247 aa22.21■■□□□ 1.15
DDX55-204ENST00000536079 PUM3Q15397 648 aaKnown RBP22.21■■□□□ 1.15
DDX55-204ENST00000536079 IL1R1P14778 569 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 BCAMP50895 628 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 FBXO33Q7Z6M2 555 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 GPRC5DQ9NZD1 345 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 JAG2Q9Y219 1238 aa22.2■■□□□ 1.14
DDX55-204ENST00000536079 USP17L3A6NCW0 530 aa22.19■■□□□ 1.14
DDX55-204ENST00000536079 USP17L4A6NCW7 530 aa22.19■■□□□ 1.14
DDX55-204ENST00000536079 SURF6O75683 361 aaKnown RBP22.19■■□□□ 1.14
DDX55-204ENST00000536079 ADORA1P30542 326 aa22.19■■□□□ 1.14
DDX55-204ENST00000536079 HIBADHP31937 336 aaKnown RBP22.19■■□□□ 1.14
DDX55-204ENST00000536079 DACT2Q5SW24 774 aa22.19■■□□□ 1.14
DDX55-204ENST00000536079 USP17L1Q7RTZ2 530 aa22.19■■□□□ 1.14
DDX55-204ENST00000536079 NOP58Q9Y2X3 529 aaKnown RBP22.19■■□□□ 1.14
DDX55-204ENST00000536079 ZNF646O15015 1829 aaPredicted RBP22.18■■□□□ 1.14
DDX55-204ENST00000536079 EPHX2P34913 555 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 TIMM10P62072 90 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 GTF2IP78347 998 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.14
DDX55-204ENST00000536079 ATP2B3Q16720 1220 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 RSBN1LQ6PCB5 846 aaPredicted RBP22.18■■□□□ 1.14
DDX55-204ENST00000536079 ZNF804AQ7Z570 1209 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 TDRD7Q8NHU6 1098 aaKnown RBP22.18■■□□□ 1.14
DDX55-204ENST00000536079 LPIN2Q92539 896 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 GMLQ99445 158 aa22.18■■□□□ 1.14
DDX55-204ENST00000536079 IQSEC3Q9UPP2 1182 aaPredicted RBP22.18■■□□□ 1.14
DDX55-204ENST00000536079 IQCA1LA6NCM1 817 aa22.17■■□□□ 1.14
DDX55-204ENST00000536079 TTLL5Q6EMB2 1281 aa22.17■■□□□ 1.14
DDX55-204ENST00000536079 RPAP2Q8IXW5 612 aaPredicted RBP22.17■■□□□ 1.14
DDX55-204ENST00000536079 CNOT7Q9UIV1 285 aaKnown RBP22.17■■□□□ 1.14
DDX55-204ENST00000536079 EXOC6BQ9Y2D4 811 aa22.17■■□□□ 1.14
DDX55-204ENST00000536079 EGFRP00533 1210 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 IFIT1P09914 478 aaKnown RBP22.16■■□□□ 1.14
DDX55-204ENST00000536079 SLC5A1P13866 664 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 STRIP1Q5VSL9 837 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 MICALL2Q8IY33 904 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 CERS5Q8N5B7 392 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 PCDHB15Q9Y5E8 787 aa22.16■■□□□ 1.14
DDX55-204ENST00000536079 TOMM70O94826 608 aa22.15■■□□□ 1.14
DDX55-204ENST00000536079 LMOD1P29536 600 aaPredicted RBP22.15■■□□□ 1.14
DDX55-204ENST00000536079 HIRAP54198 1017 aaPredicted RBP22.15■■□□□ 1.14
DDX55-204ENST00000536079 TRPM4Q8TD43 1214 aa22.15■■□□□ 1.14
DDX55-204ENST00000536079 DPF2Q92785 391 aa22.15■■□□□ 1.14
DDX55-204ENST00000536079 CHMP4BQ9H444 224 aaKnown RBP22.15■■□□□ 1.14
DDX55-204ENST00000536079 SCN4AP35499 1836 aa22.15■■□□□ 1.14
DDX55-204ENST00000536079 A0A1B0GUL7 405 aa22.14■■□□□ 1.13
DDX55-204ENST00000536079 EAPPQ56P03 285 aaPredicted RBP22.14■■□□□ 1.13
DDX55-204ENST00000536079 SAMD7Q7Z3H4 446 aa22.14■■□□□ 1.13
DDX55-204ENST00000536079 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
DDX55-204ENST00000536079 PSME4Q14997 1843 aa22.14■■□□□ 1.13
DDX55-204ENST00000536079 RPS12P25398 132 aaKnown RBP22.13■■□□□ 1.13
DDX55-204ENST00000536079 PHKA1P46020 1223 aa22.13■■□□□ 1.13
DDX55-204ENST00000536079 CAVIN4Q5BKX8 364 aa22.13■■□□□ 1.13
DDX55-204ENST00000536079 COL1A1P02452 1464 aaPredicted RBP22.12■■□□□ 1.13
DDX55-204ENST00000536079 C1QTNF8P60827 252 aa22.12■■□□□ 1.13
DDX55-204ENST00000536079 OS9Q13438 667 aaPredicted RBP22.12■■□□□ 1.13
DDX55-204ENST00000536079 VPS37DQ86XT2 251 aa22.12■■□□□ 1.13
DDX55-204ENST00000536079 AGBL3Q8NEM8 1001 aa22.12■■□□□ 1.13
DDX55-204ENST00000536079 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
DDX55-204ENST00000536079 XAGE2Q96GT9 111 aa22.12■■□□□ 1.13
DDX55-204ENST00000536079 ADARB2Q9NS39 739 aaKnown RBP22.12■■□□□ 1.13
DDX55-204ENST00000536079 ZNF609O15014 1411 aa22.12■■□□□ 1.13
DDX55-204ENST00000536079 FAM205AQ6ZU69 1335 aa22.11■■□□□ 1.13
DDX55-204ENST00000536079 GRIK5Q16478 980 aa22.11■■□□□ 1.13
DDX55-204ENST00000536079 TBC1D10BQ4KMP7 808 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms