RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PAG1Q9NWQ8 432 aa21.07■□□□□ 0.96
RAB40C-203ENST00000535977 SPC24Q8NBT2 197 aa21.07■□□□□ 0.96
RAB40C-203ENST00000535977 A1BGP04217 495 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 NEUROD6Q96NK8 337 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 ERICH4A6NGS2 130 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
RAB40C-203ENST00000535977 GTF3C6Q969F1 213 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 LLPHQ9BRT6 129 aaKnown RBP21.06■□□□□ 0.96
RAB40C-203ENST00000535977 UBAP1LF5GYI3 381 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 TULP2O00295 520 aa21.06■□□□□ 0.96
RAB40C-203ENST00000535977 SPEF2Q9C093 1822 aa21.05■□□□□ 0.96
RAB40C-203ENST00000535977 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
RAB40C-203ENST00000535977 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
RAB40C-203ENST00000535977 ISCA1Q9BUE6 129 aa21.05■□□□□ 0.96
RAB40C-203ENST00000535977 TPM3P06753 285 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 CYP21A2P08686 494 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 ZMYM1Q5SVZ6 1142 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 AKAP2Q9Y2D5 859 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 TAF6LQ9Y6J9 622 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 CDC37L1Q7L3B6 337 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 CEP126Q9P2H0 1117 aa21.04■□□□□ 0.96
RAB40C-203ENST00000535977 SMTNL1A8MU46 457 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 Q6ZUG5 572 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
RAB40C-203ENST00000535977 TJP1Q07157 1748 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 TCEANC2Q96MN5 208 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 FUCA2Q9BTY2 467 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 ZSCAN16Q9H4T2 348 aaPredicted RBP21.03■□□□□ 0.96
RAB40C-203ENST00000535977 ZBTB3Q9H5J0 574 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 CALCOCO1Q9P1Z2 691 aa21.03■□□□□ 0.96
RAB40C-203ENST00000535977 GOLIM4O00461 696 aa21.02■□□□□ 0.96
RAB40C-203ENST00000535977 IFIT1P09914 478 aaKnown RBP21.02■□□□□ 0.96
RAB40C-203ENST00000535977 EVA1CP58658 441 aa21.02■□□□□ 0.96
RAB40C-203ENST00000535977 TIMM10P62072 90 aa21.02■□□□□ 0.96
RAB40C-203ENST00000535977 CCDC57Q2TAC2 916 aa21.02■□□□□ 0.96
RAB40C-203ENST00000535977 RNF113AO15541 343 aaKnown RBP21.01■□□□□ 0.95
RAB40C-203ENST00000535977 CCDC192P0DO97 292 aa21.01■□□□□ 0.95
RAB40C-203ENST00000535977 CCDC129Q6ZRS4 1044 aa21.01■□□□□ 0.95
RAB40C-203ENST00000535977 C16orf45Q96MC5 204 aaPredicted RBP21.01■□□□□ 0.95
RAB40C-203ENST00000535977 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
RAB40C-203ENST00000535977 PLA2G12BQ9BX93 195 aa21.01■□□□□ 0.95
RAB40C-203ENST00000535977 TTC6Q86TZ1 520 aa21.01■□□□□ 0.95
RAB40C-203ENST00000535977 TMOD3Q9NYL9 352 aa21.01■□□□□ 0.95
RAB40C-203ENST00000535977 A0A1B0GUL7 405 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 GOLGA6L4A6NEF3 574 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 HSP90B1P14625 803 aaKnown RBP21■□□□□ 0.95
RAB40C-203ENST00000535977 CCDC158Q5M9N0 1113 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 TRIM34Q9BYJ4 488 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 NDUFB9Q9Y6M9 179 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 PFKFB2O60825 505 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 ZFYP08048 801 aaPredicted RBP21■□□□□ 0.95
RAB40C-203ENST00000535977 STK3Q13188 491 aa21■□□□□ 0.95
RAB40C-203ENST00000535977 COL9A3Q14050 684 aaPredicted RBP21■□□□□ 0.95
RAB40C-203ENST00000535977 PCCAP05165 728 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-203ENST00000535977 PTGS1P23219 599 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 SPATA32Q96LK8 384 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 AGXT2Q9BYV1 514 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 LRRC24Q50LG9 513 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 KIF6Q6ZMV9 814 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 CERS3Q8IU89 383 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 SMARCC2Q8TAQ2 1214 aa20.99■□□□□ 0.95
RAB40C-203ENST00000535977 TRERF1Q96PN7 1200 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 DDX19AQ9NUU7 478 aaKnown RBP20.98■□□□□ 0.95
RAB40C-203ENST00000535977 CFAP45Q9UL16 551 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 FERMT3Q86UX7 667 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 H3BQV1 296 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 STARD3NLO95772 234 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 IRX3P78415 501 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-203ENST00000535977 EXOSC10Q01780 885 aaKnown RBP20.98■□□□□ 0.95
RAB40C-203ENST00000535977 MAP3K11Q16584 847 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 IFFO2Q5TF58 517 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 GIMAP6Q6P9H5 292 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 FBXL16Q8N461 479 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 NUP62CLQ9H1M0 184 aa20.98■□□□□ 0.95
RAB40C-203ENST00000535977 SHANK3Q9BYB0 1731 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 HSPD1P10809 573 aaKnown RBP20.97■□□□□ 0.95
RAB40C-203ENST00000535977 BRF1Q92994 677 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 TOM1O60784 492 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 TNNT1P13805 278 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 ATL3Q6DD88 541 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 NAA16Q6N069 864 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-203ENST00000535977 CCDC112Q8NEF3 446 aa20.97■□□□□ 0.95
RAB40C-203ENST00000535977 LEO1Q8WVC0 666 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-203ENST00000535977 KMT5BQ4FZB7 885 aa20.96■□□□□ 0.95
RAB40C-203ENST00000535977 ZBTB38Q8NAP3 1195 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-203ENST00000535977 CSF1RP07333 972 aa20.96■□□□□ 0.95
RAB40C-203ENST00000535977 GORABQ5T7V8 394 aa20.96■□□□□ 0.95
RAB40C-203ENST00000535977 ZNF274Q96GC6 653 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-203ENST00000535977 ZNF594Q96JF6 807 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-203ENST00000535977 ST7Q9NRC1 585 aa20.96■□□□□ 0.95
RAB40C-203ENST00000535977 RESTQ13127 1097 aa20.95■□□□□ 0.94
RAB40C-203ENST00000535977 HSP90AB3PQ58FF7 597 aa20.95■□□□□ 0.94
RAB40C-203ENST00000535977 TTC39AQ5SRH9 613 aa20.95■□□□□ 0.94
RAB40C-203ENST00000535977 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
RAB40C-203ENST00000535977 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms