RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 NLGN1Q8N2Q7 840 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 EAF2Q96CJ1 260 aaPredicted RBP11.64□□□□□ -0.55
CHKA-207ENST00000533728 DIAPH3Q9NSV4 1193 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
CHKA-207ENST00000533728 PA2G4Q9UQ80 394 aaKnown RBP11.64□□□□□ -0.55
CHKA-207ENST00000533728 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 TCHHQ07283 1943 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 ATP5JP18859 108 aa11.63□□□□□ -0.55
CHKA-207ENST00000533728 COL9A1P20849 921 aa11.63□□□□□ -0.55
CHKA-207ENST00000533728 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
CHKA-207ENST00000533728 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
CHKA-207ENST00000533728 CTU1Q7Z7A3 348 aaKnown RBP11.63□□□□□ -0.55
CHKA-207ENST00000533728 TMX3Q96JJ7 454 aa11.63□□□□□ -0.55
CHKA-207ENST00000533728 SPTBN5Q9NRC6 3674 aaKnown RBP11.63□□□□□ -0.55
CHKA-207ENST00000533728 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
CHKA-207ENST00000533728 LAMB2P55268 1798 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 A0A087WZG4 1122 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 FSD2A1L4K1 749 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 BAG4O95429 457 aaKnown RBP11.62□□□□□ -0.55
CHKA-207ENST00000533728 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
CHKA-207ENST00000533728 ERFEQ4G0M1 354 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 CIAPIN1Q6FI81 312 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 ISCA1Q9BUE6 129 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 PLA2G12BQ9BX93 195 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 ASAP1Q9ULH1 1129 aa11.62□□□□□ -0.55
CHKA-207ENST00000533728 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 NFKBIEO00221 500 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 CIAO1O76071 339 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 PLA2G5P39877 138 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 FOXO4P98177 505 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 TTC14Q96N46 770 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 PALD1Q9ULE6 856 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 SNX14Q9Y5W7 946 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 MED23Q9ULK4 1368 aa11.61□□□□□ -0.55
CHKA-207ENST00000533728 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 ARAP2Q8WZ64 1704 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 GNPATO15228 680 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 SIK1P57059 783 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 TNNI3KQ59H18 835 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHKA-207ENST00000533728 ZSCAN31Q96LW9 406 aaPredicted RBP11.6□□□□□ -0.55
CHKA-207ENST00000533728 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
CHKA-207ENST00000533728 FPGT-TNNI3KV9GXZ4 949 aa11.6□□□□□ -0.55
CHKA-207ENST00000533728 ABCC12Q96J65 1359 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 STARD3NLO95772 234 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
CHKA-207ENST00000533728 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 NECTIN1Q15223 517 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 HSP90AB3PQ58FF7 597 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
CHKA-207ENST00000533728 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
CHKA-207ENST00000533728 MAP4K1Q92918 833 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 IL25Q9H293 177 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 TLL2Q9Y6L7 1015 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 CDHR2Q9BYE9 1310 aa11.59□□□□□ -0.55
CHKA-207ENST00000533728 LAMA3Q16787 3333 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 GOLGA6L3A6NEY3 463 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 BRD1O95696 1058 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 TTLL7Q6ZT98 887 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
CHKA-207ENST00000533728 SNX27Q96L92 541 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 HAUS7Q99871 368 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 SH2B1Q9NRF2 756 aaPredicted RBP11.58□□□□□ -0.56
CHKA-207ENST00000533728 LIMCH1Q9UPQ0 1083 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 ZNF609O15014 1411 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 AKAP11Q9UKA4 1901 aa11.58□□□□□ -0.56
CHKA-207ENST00000533728 RPAP1Q9BWH6 1393 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 PTCD1O75127 700 aaKnown RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 MAP4K4O95819 1239 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 A1BGP04217 495 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 PCCAP05165 728 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 PSMA5P28066 241 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 MRE11P49959 708 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 FAM122AQ96E09 287 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 CCDC8Q9H0W5 538 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 DBNLQ9UJU6 430 aaKnown RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.57□□□□□ -0.56
CHKA-207ENST00000533728 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
CHKA-207ENST00000533728 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 EYA2O00167 538 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
CHKA-207ENST00000533728 TFCP2Q12800 502 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms