RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
COPB1-209ENST00000533096 CTSWP56202 376 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 ZNF853P0CG23 659 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 PRPF38BQ5VTL8 546 aaKnown RBP16.78■□□□□ 0.28
COPB1-209ENST00000533096 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 TXNRD3Q86VQ6 643 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 KIAA0825Q8IV33 1275 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
COPB1-209ENST00000533096 ANKRD36CQ5JPF3 1778 aa16.78■□□□□ 0.28
COPB1-209ENST00000533096 LAMB2P55268 1798 aa16.77■□□□□ 0.28
COPB1-209ENST00000533096 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
COPB1-209ENST00000533096 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.28
COPB1-209ENST00000533096 SLC10A4Q96EP9 437 aa16.77■□□□□ 0.28
COPB1-209ENST00000533096 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
COPB1-209ENST00000533096 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
COPB1-209ENST00000533096 FKTNO75072 461 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 IGKV5-2P06315 115 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 GTF2IP78347 998 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
COPB1-209ENST00000533096 NEXNQ0ZGT2 675 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
COPB1-209ENST00000533096 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
COPB1-209ENST00000533096 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
COPB1-209ENST00000533096 KCNJ4P48050 445 aa16.75■□□□□ 0.27
COPB1-209ENST00000533096 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
COPB1-209ENST00000533096 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
COPB1-209ENST00000533096 KLRK1P26718 216 aa16.74■□□□□ 0.27
COPB1-209ENST00000533096 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
COPB1-209ENST00000533096 MPHOSPH8Q99549 860 aa16.74■□□□□ 0.27
COPB1-209ENST00000533096 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
COPB1-209ENST00000533096 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
COPB1-209ENST00000533096 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
COPB1-209ENST00000533096 DLGAP5Q15398 846 aa16.73■□□□□ 0.27
COPB1-209ENST00000533096 SPRYD7Q5W111 196 aa16.73■□□□□ 0.27
COPB1-209ENST00000533096 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
COPB1-209ENST00000533096 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
COPB1-209ENST00000533096 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
COPB1-209ENST00000533096 MYO3BQ8WXR4 1341 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 G2E3Q7L622 706 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 APOBEC3FQ8IUX4 373 aaKnown RBP16.72■□□□□ 0.27
COPB1-209ENST00000533096 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
COPB1-209ENST00000533096 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
COPB1-209ENST00000533096 ANKRD2Q9GZV1 360 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 DEFB129Q9H1M3 183 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 MED23Q9ULK4 1368 aa16.72■□□□□ 0.27
COPB1-209ENST00000533096 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 H7C1W4 665 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 SNAP23O00161 211 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 ITGA6P23229 1130 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
COPB1-209ENST00000533096 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
COPB1-209ENST00000533096 CLRN2A0PK11 232 aa16.7■□□□□ 0.26
COPB1-209ENST00000533096 TAF5LO75529 589 aa16.7■□□□□ 0.26
COPB1-209ENST00000533096 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
COPB1-209ENST00000533096 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
COPB1-209ENST00000533096 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
COPB1-209ENST00000533096 PLIN1O60240 522 aa16.69■□□□□ 0.26
COPB1-209ENST00000533096 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
COPB1-209ENST00000533096 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
COPB1-209ENST00000533096 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
COPB1-209ENST00000533096 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
COPB1-209ENST00000533096 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
COPB1-209ENST00000533096 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
COPB1-209ENST00000533096 INHBEP58166 350 aa16.68■□□□□ 0.26
COPB1-209ENST00000533096 CHRNDQ07001 517 aa16.68■□□□□ 0.26
COPB1-209ENST00000533096 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
COPB1-209ENST00000533096 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
COPB1-209ENST00000533096 SCN9AQ15858 1988 aa16.68■□□□□ 0.26
COPB1-209ENST00000533096 MMP14P50281 582 aa16.67■□□□□ 0.26
COPB1-209ENST00000533096 GCKRQ14397 625 aa16.67■□□□□ 0.26
COPB1-209ENST00000533096 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
COPB1-209ENST00000533096 ZNF609O15014 1411 aa16.67■□□□□ 0.26
COPB1-209ENST00000533096 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
COPB1-209ENST00000533096 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 CFAP100Q494V2 611 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
COPB1-209ENST00000533096 OTOP1Q7RTM1 612 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
COPB1-209ENST00000533096 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
COPB1-209ENST00000533096 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
COPB1-209ENST00000533096 MYO1BO43795 1136 aa16.65■□□□□ 0.26
COPB1-209ENST00000533096 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
COPB1-209ENST00000533096 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms