RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 ALX3O95076 343 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 HYAL2Q12891 473 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 SETDB1Q15047 1291 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
ATM-217ENST00000531957 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 LACRTQ9GZZ8 138 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 GGNBP2Q9H3C7 697 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 ELP3Q9H9T3 547 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 ANO2Q9NQ90 1003 aa6.7□□□□□ -1.34
ATM-217ENST00000531957 SUPT5HO00267 1087 aaKnown RBP6.69□□□□□ -1.34
ATM-217ENST00000531957 DHX15O43143 795 aaKnown RBP6.69□□□□□ -1.34
ATM-217ENST00000531957 PDGFAP04085 211 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 CDC25BP30305 580 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 ZNF211Q13398 564 aaPredicted RBP6.69□□□□□ -1.34
ATM-217ENST00000531957 C8orf34Q49A92 452 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 CNTN3Q9P232 1028 aa6.69□□□□□ -1.34
ATM-217ENST00000531957 ABL1P00519 1130 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 ACPPP15309 386 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 GRIK1P39086 918 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 PDE12Q6L8Q7 609 aaKnown RBP6.68□□□□□ -1.34
ATM-217ENST00000531957 TXNDC11Q6PKC3 985 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 STOML1Q9UBI4 398 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
ATM-217ENST00000531957 LINC01387J3KSC0 135 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 KIF4AO95239 1232 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 AAMPQ13685 434 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 INTS5Q6P9B9 1019 aaKnown RBP6.67□□□□□ -1.34
ATM-217ENST00000531957 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
ATM-217ENST00000531957 C1orf127Q8N9H9 656 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 POLIQ9UNA4 740 aa6.67□□□□□ -1.34
ATM-217ENST00000531957 TRPA1O75762 1119 aa6.66□□□□□ -1.34
ATM-217ENST00000531957 SMNDC1O75940 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
ATM-217ENST00000531957 MZF1P28698 734 aaPredicted RBP6.66□□□□□ -1.34
ATM-217ENST00000531957 FAM117BQ6P1L5 589 aa6.66□□□□□ -1.34
ATM-217ENST00000531957 ACAD11Q709F0 780 aa6.66□□□□□ -1.34
ATM-217ENST00000531957 UTP4Q969X6 686 aaKnown RBP6.66□□□□□ -1.34
ATM-217ENST00000531957 FMNL2Q96PY5 1086 aa6.66□□□□□ -1.34
ATM-217ENST00000531957 FAM177BA6PVY3 158 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 TGFB1P01137 390 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 PCSK2P16519 638 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 YBX3P16989 372 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATM-217ENST00000531957 CES1P23141 567 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 GP2P55259 537 aaKnown RBP6.65□□□□□ -1.34
ATM-217ENST00000531957 CEP120Q8N960 986 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 CARD10Q9BWT7 1032 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 PBX4Q9BYU1 374 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 CHRDQ9H2X0 955 aa6.65□□□□□ -1.34
ATM-217ENST00000531957 CDC27P30260 824 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 CD68P34810 354 aaPredicted RBP6.64□□□□□ -1.35
ATM-217ENST00000531957 NFIAQ12857 509 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 TTC16Q8NEE8 873 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 HHIPQ96QV1 700 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 POP1Q99575 1024 aaKnown RBP6.64□□□□□ -1.35
ATM-217ENST00000531957 DBNDD2Q9BQY9 259 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 CCDC87Q9NVE4 849 aa6.64□□□□□ -1.35
ATM-217ENST00000531957 FZD6O60353 706 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 FAM13AO94988 1023 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 RPLP1P05386 114 aaKnown RBP6.63□□□□□ -1.35
ATM-217ENST00000531957 NPR3P17342 541 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 EPHA1P21709 976 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 SERPINB4P48594 390 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 ALKBH2Q6NS38 261 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 XKR5Q6UX68 686 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 ZDHHC13Q8IUH4 622 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 KLHL23Q8NBE8 558 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 UBL7Q96S82 380 aaPredicted RBP6.63□□□□□ -1.35
ATM-217ENST00000531957 KRTAP9-9Q9BYP9 154 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
ATM-217ENST00000531957 SALL4Q9UJQ4 1053 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
ATM-217ENST00000531957 MTMR7Q9Y216 660 aa6.63□□□□□ -1.35
ATM-217ENST00000531957 EREGO14944 169 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 WISP1O95388 367 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 SPINK2P20155 84 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 FKBP4Q02790 459 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATM-217ENST00000531957 ARMC10Q8N2F6 343 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 KCNK4Q9NYG8 393 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 TIMELESSQ9UNS1 1208 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 USTQ9Y2C2 406 aa6.62□□□□□ -1.35
ATM-217ENST00000531957 OAS3Q9Y6K5 1087 aaKnown RBP6.62□□□□□ -1.35
ATM-217ENST00000531957 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
ATM-217ENST00000531957 SF3B2Q13435 895 aaKnown RBP6.61□□□□□ -1.35
ATM-217ENST00000531957 RNF43Q68DV7 783 aa6.61□□□□□ -1.35
ATM-217ENST00000531957 FAM46AQ96IP4 442 aaKnown RBP6.61□□□□□ -1.35
ATM-217ENST00000531957 MYRFLQ96LU7 910 aa6.61□□□□□ -1.35
ATM-217ENST00000531957 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
ATM-217ENST00000531957 H3BRB1 525 aa6.6□□□□□ -1.35
ATM-217ENST00000531957 NFKBIEO00221 500 aa6.6□□□□□ -1.35
ATM-217ENST00000531957 FSCN2O14926 492 aa6.6□□□□□ -1.35
ATM-217ENST00000531957 DDX3YO15523 660 aaKnown RBP6.6□□□□□ -1.35
ATM-217ENST00000531957 PHACTR2O75167 634 aa6.6□□□□□ -1.35
ATM-217ENST00000531957 TAL1P17542 331 aaPredicted RBP6.6□□□□□ -1.35
ATM-217ENST00000531957 PTPRAP18433 802 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms